Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1463g00003 ATGGATATAAATCTGATTCCTAGACTTGATCCTGAATTTGACAGTATAGAAGAATCATGGGAATTTTGGAAAGCATATGGTAGGAGGACTGGTTTCGGTGTTCGAAAACAAAGTTTTAACAAGTGTAAAAAAGACAAGTCATCATATTCTTCTTATCTATATGTTTGTCGCAAAGAAGGGGTAAAAAAGCCAGACAAACGAGATGCTCAAACAAGGAAGCCTAGAGATGAGATAAGAACAGGTTGCAAAGGAAGAATGAAAGTGAAAAATGTAAATGGAAAATTCAAAATAAATGAAGTTTTCCTAGACCATAATCATCCTCTTCAGCCTCCTGAAGCTATTCATTTGTTTGCATCTTATCGAGGATTAACATCAGCTCAACGTTATGAATTAGAAAATGCTAAAAAAGTTGGGATTAGTCAAAAATCAGCATTCAATTTGCAAAGTCAATATGCAGGAGGTCGAAATAATTTGGGATTTACAAGAGTTGATGTAAAGAATTATCTTAATTCAAAAAGGCAACAAGCTATGGGATACGGTGAAGCTGGATGTATATTTCGGTATTTTGAGCAACAATTAGCAGACAATCCGTCTTTTTTTCATGCTCACCAAATGGACTCAAATGAGCAAGTGACAAATGTTTTTTGGGCTGATGCACGCATGTTGATCGATTATGCTTGCTTTGGAGAAGTCATTTCACTTGATACAACTTACTGCACAAACTGTGAATATAGACCTCTTGCAATTTTCTCTGGCTTCAACCATTACAGAAAAGGGGCCATTAACTTTTTCACTGACCAAGATGCTGCTATGTCACGAGCATTACAAGAAGTGATGCCAGATGTAAAGCATGCCTTGTGCACATGGCATATTTCAAATAATGCAATGAAGCACCTTCCAAATTCAATGGTGAGTGATTTTAACAGTTGCATGTATCATTGTTGGGATGAAACTGAGTTTGAAGAATCTTGGCAAGCATTGTTGTCCAAACAAGATATGGTAGAAAACTCATGGTTGATGTCCATATATCAGATAAAAGAGAAATGGGTAGCATGCTATATGAAGAATTCAAGGACACTTGGCATGAGAAGCACACAAATTAGCAAAAGTGTCAATGCATCTGTCAAAAGCTGCACCCATGTAAAATTGGATATCAATGGATTCTTTGAAAAATTTGAACAAGTTTTGGAGGAAAAACGTTATAATGAATTGCAGGCAGATTTTGAGACACTTGACAGGTTGCCAAGGTTGATATTACAAAGTTCAAGTATGCTTCATCAACTTGCTGAGGTCTATACTCGACCTATTTTTGACTTGTTCCAATACCAATGTGATCTACGTGATGCTACATGTATAAAAGAGAGAAAAGAAAGAAAGATCACCATGAACGATGATAGTGCCACCATGTTTGATTATGTGATCACCATGGATAATAGTAAATGGGAGCATAGTTTGACATTTGAACCTTCCACAGAGACAATCACCTGCAGTTGCAAAAAGTTTGAATGA 1509 0.3638 MDINLIPRLDPEFDSIEESWEFWKAYGRRTGFGVRKQSFNKCKKDKSSYSSYLYVCRKEGVKKPDKRDAQTRKPRDEIRTGCKGRMKVKNVNGKFKINEVFLDHNHPLQPPEAIHLFASYRGLTSAQRYELENAKKVGISQKSAFNLQSQYAGGRNNLGFTRVDVKNYLNSKRQQAMGYGEAGCIFRYFEQQLADNPSFFHAHQMDSNEQVTNVFWADARMLIDYACFGEVISLDTTYCTNCEYRPLAIFSGFNHYRKGAINFFTDQDAAMSRALQEVMPDVKHALCTWHISNNAMKHLPNSMVSDFNSCMYHCWDETEFEESWQALLSKQDMVENSWLMSIYQIKEKWVACYMKNSRTLGMRSTQISKSVNASVKSCTHVKLDINGFFEKFEQVLEEKRYNELQADFETLDRLPRLILQSSSMLHQLAEVYTRPIFDLFQYQCDLRDATCIKERKERKITMNDDSATMFDYVITMDNSKWEHSLTFEPSTETITCSCKKFE 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1463g00003 502 Pfam MULE transposase domain 263 294 IPR018289 -
Pral1463g00003 502 Pfam FAR1 DNA-binding domain 21 110 IPR004330 -
Pral1463g00003 502 PANTHER OS01G0519700 PROTEIN 7 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1463g00003 Pral-Chr1463 24473 26073 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral1463g00003 FAR1 2.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1463g00003 - - pcin:129316824 642.884