Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1460g00014 ATGGATTCCAAGATGATATGGGAGTCCGCAGCAAATAAAAGTGAGGACGATATTTGCGTGAGGAAAGGTCCATGGACTGTTGAAGAGGACACCATTCTCGCCAATTACGTGACTACTCATGGCGAAGGTCGGTGGAATTTTGTCGCTCGCTGTGCAGGTCTGAATAGAACGGGCAAAAGTTGCAGACTGAGATGGCTAAACTACTTGCGTCCCGATGTTCGGCGCGGAAATATCACACTCCAGGAACAGATATTGATTCTCGACCTCCATTCTCGCTGGGGAAATAGGTGGTCTAAAATCGCGGAGCAATTGCCAGGGAGAACAGACAACGAGATAAAAAATTATTGGAGAACCAGAGTGATGAAGCAGGCCAAGCAGCTCAAGTGTGACGTCAACAGCAAACAGTTCAGAGACGCCATGCATTACGTTTGGATTCCCCGCATGCTGGAGCGGATTCGGGCCTCGTCCGACTATCAGCATAGCTCGAGAGCAGAGTGGACAAGACCCAATTATGCTAAGCTCCAAGTTGCTTCGAATTCAGGCAGCAGTGAAACAACGGATCATCCAACGGTAAACGGGTCGGTGTCCCAGACAGTAGAGCAGGAAGACTCGCTGGAGAATCTATGGAGCGATGAGAATATATGGTTTTTGCGGCAACAACTTTGTGATGAGTTCTAA 678 0.4867 MDSKMIWESAANKSEDDICVRKGPWTVEEDTILANYVTTHGEGRWNFVARCAGLNRTGKSCRLRWLNYLRPDVRRGNITLQEQILILDLHSRWGNRWSKIAEQLPGRTDNEIKNYWRTRVMKQAKQLKCDVNSKQFRDAMHYVWIPRMLERIRASSDYQHSSRAEWTRPNYAKLQVASNSGSSETTDHPTVNGSVSQTVEQEDSLENLWSDENIWFLRQQLCDEF 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1460g00014 225 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Pral1460g00014 225 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 20 199 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pral1460g00014 225 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Pral1460g00014 225 Pfam Myb-like DNA-binding domain 75 118 IPR001005 -
Pral1460g00014 225 CDD SANT 24 69 IPR001005 -
Pral1460g00014 225 Gene3D - 22 74 - -
Pral1460g00014 225 Gene3D - 79 120 - -
Pral1460g00014 225 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Pral1460g00014 225 MobiDBLite consensus disorder prediction 176 199 - -
Pral1460g00014 225 ProSiteProfiles Myb-like domain profile. 21 69 IPR001005 -
Pral1460g00014 225 SMART sant 74 122 IPR001005 -
Pral1460g00014 225 SMART sant 21 71 IPR001005 -
Pral1460g00014 225 FunFam Myb transcription factor 22 74 - -
Pral1460g00014 225 FunFam MYB transcription factor 79 142 - -
Pral1460g00014 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 73 IPR017930 -
Pral1460g00014 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Pral1460g00014 225 CDD SANT 79 118 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1460g00014 Pral-Chr1460 45709 46662 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1460g00014 18 162 MYB Transcription Factor Family AT1G48000 71.724 3.47e-78 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral1460g00014 Myb_DNA-binding 8.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1460g00014 K09422 - qsa:O6P43_010892 293.508