Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1457g00009 ATGGAAGCGGCCTCTCTCAAAAGCGCAAATACCACAGCTTGCTTCGATGAATTTGAAGAAATGATTTTGAGTTTTAAAGCTCTCGAGTTGAATGTTCTGCCCATTTTAACTTCATATATACTGCGCTCCCTCCACCCCAAAAAGACCATTCCTGGAGACCCTAATCCATATATAGCCAGAGCTTTGGTATCAGTTGCTGTTGGCCATCGGAGCTCCGGAGCTGATAGTGACAAGACCATGTGCGGGGGCCTTCGAATTTCTGGAACTTTTCCAGACATTAAATTCACCTCCTGCGGTAACGTGTTCCGCCAGGCGCCAGTTCCTCCCAATTCTCTTTTGCATATTGTGGCCAGGCGATCTGCTATGGCTTCATCTTCTTCCTCTGCTCCATCTTCTCAATCTCCCAAGAAATATGATGTTTTTATTAGTTTTAGAGGTGAGGACACCCGCTTGAATTTCACAAGCCATCTTTATCATGCTCTTTGTGGACAAAAAATATATGCATACATCGATGACAGCCTCGAGAAAGGAGATGAGGTATGGCCATCTCTTGAGAAAGCCATTGAAGATTCAACTCTGTTCCTTGTGGTGTTCTCAGAAAACTATGCATCTTCCACGTGGTGCTTGAAGGAGCTTGCAAAAATATTAGAGTGCTGCAGAAATCAACGTCACCTTCTTATACCTGTGTTCTATAGAGTAGATCCTTCAGATGTGAGGAAGCAACGTGGGAGTTACCACGAAGCATTTGAAGGACATGAGCGCAAAAGCAGCATCAACACGCAACAACTGCGCCAGTGGAGGGAGGCTCTCACTCATGCTGCCAATTTATCCGGTTGGCATTGTAGCCCCGATAGGAATGAAGCGGTGCTAATTGAAGAAATAGTGAATTGTATCATGAAAGAGTTGGACCGTAGGTATCAAAGTGAAGATCATCTAAAAGGCTTGATTGGAATTCACAAAAGAATGGCCGTTGTAGAATCAATGTTGGACACAGGTTCAAAAAATGGTGGTTGCCAATTCATTGGAATTTGGGGGATGGGCGGTTTGGACAAAACAACTCTTGTAAGAGCATTGTATGACAAGCGGCATTTTGAATACGAAGGGTCTTACTTTCTGGAAAAAGTGGGAGAAAAATTAAAAAAAGATGGAATAGATGCTTTAAGGAAGGAACTTGTTTGGAGTTTATTGGGGGGTAAAGCAATATATTCTCATATCATGACTAGGCTTCGTCGGACAAAGGTTTTCATTGTGCTTGATGATGTTGATAATGCTGAACGATTAGAAAATTTAGTTGGAAGATGTGAATTTGGATCAGGTAGCAAAGTCTTAATAACAAGCAGAGATAAGCAAGTGCTTCGTACGAAAGTGGATGATAATAATATATATGCGCTTCATGGTTTGGATCCTTATGAAGCTTTTCAACTTTTCTCCTTGAATGCCTTCAAAACAGGCTGCAGTGATCTGAAGATAAGAGAGCTAGCAGAAGAAGTGACTAAATATGCAGGTGGAAATCCATTGGCTCTAAAGGTTTTAGGCTCCACCTTGCGTGGCAAAAATCAAGAAGCATGGAAAAGCCAATTGGCAAAGCTTCAAAAATTGTTTTGTCCAGAAGTCATTGATATCCTCAAATTGAGTTTTGAAGGACTTGATAAGGAAGAGAAAAATATTGTCTTGCACGTCGCATGTTTTTTCAATTATTATTATGATGCTGAGGATGTAAAAAAATTGTTAGATCCATGCGGTTATTCAACCGAGATTGGATTGGCAAGACTTGAGAAAAAGCCTTTTAGATATTGA 1797 0.4118 MEAASLKSANTTACFDEFEEMILSFKALELNVLPILTSYILRSLHPKKTIPGDPNPYIARALVSVAVGHRSSGADSDKTMCGGLRISGTFPDIKFTSCGNVFRQAPVPPNSLLHIVARRSAMASSSSSAPSSQSPKKYDVFISFRGEDTRLNFTSHLYHALCGQKIYAYIDDSLEKGDEVWPSLEKAIEDSTLFLVVFSENYASSTWCLKELAKILECCRNQRHLLIPVFYRVDPSDVRKQRGSYHEAFEGHERKSSINTQQLRQWREALTHAANLSGWHCSPDRNEAVLIEEIVNCIMKELDRRYQSEDHLKGLIGIHKRMAVVESMLDTGSKNGGCQFIGIWGMGGLDKTTLVRALYDKRHFEYEGSYFLEKVGEKLKKDGIDALRKELVWSLLGGKAIYSHIMTRLRRTKVFIVLDDVDNAERLENLVGRCEFGSGSKVLITSRDKQVLRTKVDDNNIYALHGLDPYEAFQLFSLNAFKTGCSDLKIRELAEEVTKYAGGNPLALKVLGSTLRGKNQEAWKSQLAKLQKLFCPEVIDILKLSFEGLDKEEKNIVLHVACFFNYYYDAEDVKKLLDPCGYSTEIGLARLEKKPFRY 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1457g00009 598 Gene3D - 132 303 IPR035897 -
Pral1457g00009 598 Gene3D - 304 460 IPR027417 -
Pral1457g00009 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 309 558 IPR027417 -
Pral1457g00009 598 ProSiteProfiles TIR domain profile. 136 302 IPR000157 GO:0007165
Pral1457g00009 598 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 138 592 IPR044974 GO:0006952
Pral1457g00009 598 SUPERFAMILY Toll/Interleukin receptor TIR domain 128 279 IPR035897 -
Pral1457g00009 598 FunFam Disease resistance protein (TIR-NBS-LRR class) 134 304 - -
Pral1457g00009 598 Pfam TIR domain 137 317 IPR000157 GO:0007165
Pral1457g00009 598 Pfam NB-ARC domain 325 532 IPR002182 GO:0043531
Pral1457g00009 598 Gene3D - 467 550 IPR042197 -
Pral1457g00009 598 PRINTS Disease resistance protein signature 340 355 - -
Pral1457g00009 598 PRINTS Disease resistance protein signature 501 515 - -
Pral1457g00009 598 PRINTS Disease resistance protein signature 408 422 - -
Pral1457g00009 598 SMART till_3 137 276 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1457g00009 Pral-Chr1457 92519 96920 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1457g00009 130 594 WRKY Transcription Factor Family AT4G12020 28.184 1.44e-42 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1457g00009 - - pcin:129290874 546.584