LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1457g00008	ATGGCAGATGTCAAATCATTGTTGGACAAAGGTTCAAAAATTGGTGGTTGCCAATTCATTGGAATTTGGGGGATGGGCGGTTTGGGCAAAACAACTCTTGCAAAAGCATTGTTTAACAAATTGCGTTTTAATTATGAAGGGTCTTGCCTTTTGACTAATGTAAGGGAAGAATCAAAGAGACATGGAATGGATGCTTTGAGGGAAAAAGTTGTTCGGGGGTTATTAGGGGATAAAGAATCTCACATTGGCAATGCAATATGTCCTTATACCGTCAGTAGGCTTGGTCGGAAAAAGGTTTTCATTGTGCTTGATGACGTTGATGATCTTACACATTTAGATAAGTTAGTTGGAAAACATGAATTTGGACCTGGTAGTAAAATCTTGATAACAACCAGAGATAAGCAAATACTTGGTAATGAAGTGGATGATATATATGTGCTTCGTGGTTTGAGTCCTTATGAAGCTTTTGATCTATTCTCCATCAATGCCTTTAGAAATTGCGATGTTGACCCAAAGATAAGAGAGCTAGCAGAAGAAGTGACTAAATATGCAGGTGGAAATCCATTGGCCCTAAAGGTTTTAGGCCGCCTCCTATGCGGCAAAAAGCAAGAAGCATGGAAAAGCCAATTGGACAAGCTTCAAAAATTACCTTGTCAAGAAGTCAATAAAATCCTTAGATTGAGCTTTGAAGGACTTGATGATGAGGAAGAGAAAAATATTGTCTTGCACGTCGCATGTTTTTTCAATCATGATTATGATGTTAAGGATGTAAAAAAATTGTTAGATGCATGCGGTTATTCAACTGAGATTGGATTGACAAGACTTGAAGAAAAAGCACTTTTAGATATTCATGGAGGAAAAATATGCATGCACAGTCTCATAAAACAAATGGGTAAACAAATTGTCCGTGAAGAATCATTAAAATATTCTACATGGTGCAACATATTTTGGATTTTCCAGAAAAGTTCTGAAATATTGAAGGAAAATATGGGAAGTATTGAAGGCATGATTATGAACATTTCAGAAGTTGAAGAGACGCGCGTAATTATTAAAGCATTTCGTTCAATGCCCAATCTAAAATTTCTTAGGGTTTATGGAAATTTAAATGTTCAGCTTAGGAACAAGTTAAATGCTTCTGGCATGATGTTTTTGTCAAAAAACCTCATGCTATTGGATTGGGTGGGATGCCCTTTGAAGACCTTGCCGACAACAATCAAGGGTGAAAATCTTGTTGAAATAAACATGCCCTACAGCAAATTGACAAAACTTTGGGATGGAGAGCAGAATCTCGTGAATTTAAGCAAAATCAATCTTAGTGTATCAGAAGACTTGATTGAGCTCCCAAATTTTTCCAAGGCCATACATCTTGCAGAAGTTGATCTCAATTATTGTAGAAAATTGCAGAATGTTCATCCATCTATTTTATCTCTTCATAGCCTCCATTGTTTATCTCTAATAGATTGCAAAGCTCTTACTAGCCTTACCAGCAACACCCATCTCAAATCACTGGGGAAACTCAGCTTGGCGGGATGCTCAGGACTGAGTGAATTTTCGGTGACCTCAGAAAAACAATCGTTTCTCTGGGTGCGTGACGCAACCATCAATGGTGAGTTGTGCTCATCAAGCGGACATCTCAGCAAAATTGATCTTTTGCATCTACAAAGATGCGAAGGTGTGACAAGTCTCCACAAATTGGTTGACATGCGCACCCTTGGATACCTTGATGCTGATTATTGTAATAAGTTAGCATCAAATCTGTGTTCCAAATTTGATGAGATGCGTGCTTTGCACTTTCTACGGCTGACTAATTGTAGTGAATTATATGAAGTTCCTGACAACATCAGCTTGTTGGCGTCATTACGTCAGTTAGATCTCTCAGGGAGTAATATAGAGACCTTGCCTTTAAGCATCAAACATCTTTCAAGCCTGGAAGAACTCACCTTAAAAGGATGCAAAAGGCTTCTGTCTCTACCACAACTCCCTCCCTCTATCTTACTACTGCACGTCAATGACTGCCTGTCCCTTGAGACTTTACATTTACCTTTAATGAGTGAAGATAGAGAAGGAGATCAATTTTCTCCTGAAGAAATCAGTCTCATAAATTGCATGAAGTTGGATGGGCAGTCAATCAAAGCTGTTGAGGCCAGAGTGCTACTTGCCATAAATAACAACAAAGCCATTTATTTCTCGGCTAAAATGGAATATCCGGGAAGAAGAGTTGCAGAGTGGGTCATGTATAGGACTACACAGTCTTTCCTGACTGTGGATCTCAGTTCGATTCCACAACCTTGGGATGGCGCTTTCATTTTTTGCGCCGTCATTTCTGGATCATCACGGTGCCCATATATTACAGCCGAATTGTTTATTGATGGTCAACATGCTTCCACGTTTGAGCACTACTCTCTCGGTGAGTCCGTGTTATCAGATCACTCCCTGTTATCAGATCATGTTGTTCTTTGGTGCGATCAAGAGCCATGTCGAGAAGTACAAAGCAAAATTGAAGAAAAGAAAATAGAAGCCCAAAGCAACACTTCTTATCATCCATTGCTTCAATTTGAATTCGCAGCCTTTGATGATGATGAAACAACAGTAGAGATCAAAGAGTGGGGGGTGTGCCCGACATCTGCAGTTGAATATCAAAATTACATCAAACAAATTCAATTGGCATTATTGCATTGCAAATCGGCCTCTCGAAAGCGCAAATATCACAGCTTACTTCGATGA	2724	0.3917	MADVKSLLDKGSKIGGCQFIGIWGMGGLGKTTLAKALFNKLRFNYEGSCLLTNVREESKRHGMDALREKVVRGLLGDKESHIGNAICPYTVSRLGRKKVFIVLDDVDDLTHLDKLVGKHEFGPGSKILITTRDKQILGNEVDDIYVLRGLSPYEAFDLFSINAFRNCDVDPKIRELAEEVTKYAGGNPLALKVLGRLLCGKKQEAWKSQLDKLQKLPCQEVNKILRLSFEGLDDEEEKNIVLHVACFFNHDYDVKDVKKLLDACGYSTEIGLTRLEEKALLDIHGGKICMHSLIKQMGKQIVREESLKYSTWCNIFWIFQKSSEILKENMGSIEGMIMNISEVEETRVIIKAFRSMPNLKFLRVYGNLNVQLRNKLNASGMMFLSKNLMLLDWVGCPLKTLPTTIKGENLVEINMPYSKLTKLWDGEQNLVNLSKINLSVSEDLIELPNFSKAIHLAEVDLNYCRKLQNVHPSILSLHSLHCLSLIDCKALTSLTSNTHLKSLGKLSLAGCSGLSEFSVTSEKQSFLWVRDATINGELCSSSGHLSKIDLLHLQRCEGVTSLHKLVDMRTLGYLDADYCNKLASNLCSKFDEMRALHFLRLTNCSELYEVPDNISLLASLRQLDLSGSNIETLPLSIKHLSSLEELTLKGCKRLLSLPQLPPSILLLHVNDCLSLETLHLPLMSEDREGDQFSPEEISLINCMKLDGQSIKAVEARVLLAINNNKAIYFSAKMEYPGRRVAEWVMYRTTQSFLTVDLSSIPQPWDGAFIFCAVISGSSRCPYITAELFIDGQHASTFEHYSLGESVLSDHSLLSDHVVLWCDQEPCREVQSKIEEKKIEAQSNTSYHPLLQFEFAAFDDDETTVEIKEWGVCPTSAVEYQNYIKQIQLALLHCKSASRKRKYHSLLR	907

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1457g00008	907	SUPERFAMILY	L domain-like	290	680	-	-
	Pral1457g00008	907	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	4	240	IPR027417	-
	Pral1457g00008	907	Gene3D	-	1	143	IPR027417	-
	Pral1457g00008	907	PRINTS	Disease resistance protein signature	184	198	-	-
	Pral1457g00008	907	PRINTS	Disease resistance protein signature	19	34	-	-
	Pral1457g00008	907	PRINTS	Disease resistance protein signature	638	654	-	-
	Pral1457g00008	907	PRINTS	Disease resistance protein signature	93	107	-	-
	Pral1457g00008	907	Pfam	NB-ARC domain	5	224	IPR002182	GO:0043531
	Pral1457g00008	907	Gene3D	Ribonuclease Inhibitor	524	711	IPR032675	-
	Pral1457g00008	907	Gene3D	Ribonuclease Inhibitor	337	523	IPR032675	-
	Pral1457g00008	907	Gene3D	-	150	233	IPR042197	-
	Pral1457g00008	907	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	3	559	IPR044974	GO:0006952
	Pral1457g00008	907	Pfam	Leucine Rich Repeat	409	428	IPR011713	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1457g00008	Pral-Chr1457	80423	83598	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1457g00008	20	710	WRKY Transcription Factor Family	AT5G45050	30.652	1.91e-70	252

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1457g00008	-		-	pcin:129290874	709.909