Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1457g00006 ATGGCAGATGTACAATCGTTGTTGGACAAAGGTTCAAACAATGGTGGTTGCCAATTCATTGGAATTTGGGGCATGGGCGGTTTGGGCAAAACAACTTTTGCAAAAGCATTGTTTAACAAATTGCGTTTTACATATGAAGGGTCTTGCTTTTTGACTAATGTAAGGGAGAAATCAAAGAAACATGGGTTAGATGCTTTGAGGAAAGAACTTGTTTGGAGCTTATTAGGGGATAAAGAATCTCATATTGGCAATGCAATATATCCTTATACCATGAGTAGGTTAGGTCGGAAAAAAGTTTTCGTTGTGCTTGATGATGTTAATGATCATGAACAAATAGAAAATTTAGTTGGAAGACATGAATTTGGATCAGGTAGTAAAATCTTGATAACAACCAGAGATAGGCAAGTGTTTGCTGGTATAAAAGTGGTTGATATATATGTGCTTGAGGCTTTGAATCCTAATGAATCTTTTGATCTATTATCCATCAAAGCCTTTAAAAATGACTATGATGATATGAAGATAAGAAAGCTAGCAAATGAACTGACTCAATATGCAGATGGAAATCCATTGGCCCTAAAGGTCTTGGGCTCCTTCTTGAATGGCAAAAATCAAGAAGCATGGAAAAGCCAATTGGACAAGCTTCAAAAATTACCTTGCCGAGAAGTCAATGATATCCTCAGATTGAGCTTTGAAGGACTTGATGAGGAAGAGAAAAATATTGTCTTGCACGTCGCATGTTTTTTCAATTATTATTATGATGCTGAGGATGTAAAAAAATTGTTAGATGCATGTGGTTATTCAACTGAGATTGGATTGACGAGACTTGAAGATAAAGCTCTTTTAGATATTGATGGAGGAAAAATATGCATGCACAGTCTGATAAAACAAATGGGTAAACAAATTGTTCGTGAAGAATCATTAAAATATCCTACATGGTGCAACATATTTTGGATTTTCAAGAAAAGTTCTGAAATATTGAAAAAAAATATGGGAAGTATTGAAGGCATGATTATGAACCTTTCAGAAGTTGAAGAGACGCGCGTAATTATTAAAGCATTTCGTTCAATGCCCAATCTAAAGTTTCTTAGGGTTTATGGAAATTTAAATGTTCAGCTTAGGAACAAGCTAAATGCTTCTGGTATGATGTTTTTGTCAAGAAACCTCATGCTATTGGATTGGGTGGGATGCCCTTTAAAGACCTTGCCGACAACATTCAAGGTTGAAAATCTTGTTGAAATAAACATGCGTTACAGCAAATTGACAAAACTTTGGGATGGAGAGCAGAATCTCGTGAATTTAAGCAAAATCAATCTTAGTGGATCAGAAGACTTGATTGAGCTCCCAAATTTTTCCAAGGCCATACATCTTGCAGAAGTTGATCTCATTTGTTGTAGAAAATTGCAGAATGTTCATCCATCTATTTTATCTCTTCATAGCCTCCATTGTTTATTGCTAATAGATTGCAAAGCTCTTACTAGCCTTACCAGCAACACCCATCTCAAATCACTGGGGAAACTCAGCTTGGCGGGATGCTCAGGACTGAGTGAATTTTCGGTGACCTCAGAAAAACAATTGTTTCTCTGGGTGTGTGACGCAACCATCAATGGTGAGTTGTGCTCATCAAGCGGACATCTCAGCAAAATTAACCTTGTGCGTCTACAAAGATGCGAAGGTGTGACAAGTCTCCACAAATTGGTTGACATGCGCACCCTTGGAAGCCTTGATGCTGATTATTGTAATAAGTTAGCATCAAATCTGTGTTCCAAATTTGATGAGATGCGTGCTTTGCACTTTCTACGGCTGACTAATTGTAGTGAATTATATGAAGTTCCTGACAACATCAGCTTGTTGGCGTCATTACGTCAGTTAGATCTCTCAGGGAGTAATATAGAGACCTTGCCTTTAAGCATCAAACATCTTTCAAGCCTGCGAAGTCTCACCCTAAATGGATGCAAAAGGCTTCTGTCTCTACCACAACTCCCTCCCTCTATCTCACTACTGCACGTCAATGACTGCCTGTCCCTTGAGACTTTACATTTACCTTTAATGACTGAAGATAGAGAAGGAGATGAATTTTCTCCTGAAAAATTCAGTCTCATAAATTGCATGAAGTTGGATGGGCAGTCAATCAAAGCTGTTGAGGCCAGTGTGCTACTTGCCATAAATAACAACAAAGCCATTTATTTCTGGGCTAAATGGAATATCCGGGAAAAAGAGTTGCAGAGTGGGTCATGTATAGGACTACACAGTCTTTCCTGA 2259 0.3798 MADVQSLLDKGSNNGGCQFIGIWGMGGLGKTTFAKALFNKLRFTYEGSCFLTNVREKSKKHGLDALRKELVWSLLGDKESHIGNAIYPYTMSRLGRKKVFVVLDDVNDHEQIENLVGRHEFGSGSKILITTRDRQVFAGIKVVDIYVLEALNPNESFDLLSIKAFKNDYDDMKIRKLANELTQYADGNPLALKVLGSFLNGKNQEAWKSQLDKLQKLPCREVNDILRLSFEGLDEEEKNIVLHVACFFNYYYDAEDVKKLLDACGYSTEIGLTRLEDKALLDIDGGKICMHSLIKQMGKQIVREESLKYPTWCNIFWIFKKSSEILKKNMGSIEGMIMNLSEVEETRVIIKAFRSMPNLKFLRVYGNLNVQLRNKLNASGMMFLSRNLMLLDWVGCPLKTLPTTFKVENLVEINMRYSKLTKLWDGEQNLVNLSKINLSGSEDLIELPNFSKAIHLAEVDLICCRKLQNVHPSILSLHSLHCLLLIDCKALTSLTSNTHLKSLGKLSLAGCSGLSEFSVTSEKQLFLWVCDATINGELCSSSGHLSKINLVRLQRCEGVTSLHKLVDMRTLGSLDADYCNKLASNLCSKFDEMRALHFLRLTNCSELYEVPDNISLLASLRQLDLSGSNIETLPLSIKHLSSLRSLTLNGCKRLLSLPQLPPSISLLHVNDCLSLETLHLPLMTEDREGDEFSPEKFSLINCMKLDGQSIKAVEASVLLAINNNKAIYFWAKWNIREKELQSGSCIGLHSLS 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1457g00006 752 Gene3D - 150 234 IPR042197 -
Pral1457g00006 752 Gene3D Ribonuclease Inhibitor 328 521 IPR032675 -
Pral1457g00006 752 Gene3D - 1 145 IPR027417 -
Pral1457g00006 752 Pfam NB-ARC domain 4 220 IPR002182 GO:0043531
Pral1457g00006 752 SUPERFAMILY L domain-like 290 678 - -
Pral1457g00006 752 PRINTS Disease resistance protein signature 185 199 - -
Pral1457g00006 752 PRINTS Disease resistance protein signature 638 654 - -
Pral1457g00006 752 PRINTS Disease resistance protein signature 93 107 - -
Pral1457g00006 752 PRINTS Disease resistance protein signature 19 34 - -
Pral1457g00006 752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 242 IPR027417 -
Pral1457g00006 752 Gene3D Ribonuclease Inhibitor 522 682 IPR032675 -
Pral1457g00006 752 Pfam Leucine Rich Repeat 409 428 IPR011713 -
Pral1457g00006 752 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 559 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1457g00006 Pral-Chr1457 59894 62606 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1457g00006 20 653 WRKY Transcription Factor Family AT4G12020 31.490 3.02e-72 255