Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1457g00003 ATGGTGTATAGGAATGAAGCGGAGCTAGTTAAAGAAATAGTGAAGGATGTCAAGCAAAAGTTGCGCTCTAGGCATCCAAGTGAAGATCATCTAAAAGGCTTGATTGGAATTCGTAAAAGAATAGCAGATGTAGAATCATTGTTGGACAAATGTTCAAACAATGGTGGTTGCCAATTCATTGGAATTTGGGGCATGGGCGGTTTGGGCAAAACAACTCTTGCAAACGCATTGTTTAACAAATTGCATAGTACATATGAAGGGTCTTGCTTTTTGACTAATGTAAGGGAAAAATCAAAGAATGAAATACATGCTTTGAGGGAAAAAATTGTTTGGAGGTTATTAGGAGATAAAGAATCTCACATTGGCGATGCAGTAGATGGTTATACCGAGAGTAGGCTTGGTCAGAAAAAAGTTTTCATCGTGCTTGATGATGTTGATGATGATGAACAATTAGAAAAATTAGTTGGAAGTCGTAAATTTGGATCAGGCAGCAAAGTCTTAGTAACAACTAGAGATAAGCAAGTGCTTCGTAAGAAAGTGGATGATATTAATATACATAGGCTTCATGGTTTGGATCGTGAAGAAGCTGGTCAACTTTTCTCCTTGAATGCCTTCAAAAAAGGCTCCAGTGATCCAAAGATGAAAGGGCTAGTAGAAAACGTGACCAAATATGCAGATGGAAATCCATTGGCCCTAAAGGTTTTAGGCTCACTCTTGAATGGCATAAATCATAAAGCGTGGGAAAGCCAATTGGACAAGCTTCATAAGTTTCCTTATCCAAAAATTAATAATATCCTCAAATTGAGTTTTGAAGGACTTGATAAGGAAGAAAGAAATATTTTCTTGCATACTGCATGTTTCTTTGATTTCTTCCATCATTATGATGTCGAGGATGTTAAAAAAATGTTCAATGCATGTGGTTACTCAACAGAGATTGCATTGATAAGACTTGAAGAGAAAGCTCTTTTAGATATTGATGAAAGAAGAATACATATGCACCATCTAATAAAAGAAATGGGTAGAGAAATTGTTCAAGACCAATCATTAGAGGCTCCTCAAAAGGGCAATATATTATGGATTTCCAAGAATAATTCTGGAATATTGAAGGACAACATGGAAAAAAATGCCATTGAAGGCTGGATTCTGAACCTTTCAAAAGTTGAAGAGATGCATGTGATTATTGAAGCCTTTTATTCAATGCCCAATCTAAGGTTTCTTGAGTTTTATGGAAATATCAATGGCCATTTTGAGAACGCGTTAACATTTCCTTGTGGTATGAAGTTTTTGCCAAAAAATCTCATGCTATTGGATTGGGTGGGATACCCTTTAAAGTCATTGCCCGCAACATTTAATGCTGAAAGTCTTGTTAAAATAAACATGCCCAACAGCAAATTGACAAAACTTTGGGATGGAGAGCAGAATCTAGTGAATTTAAGAAGAATTAATCTGAGTAGATCAAGAGACTTGATTGAGCTCCCAAATTTTTCCAAGGCAATACATCTTGAAGAAGTTGATCTTGAGTGGTGCTCAAAATTGCAGAATGTTCATCCATCTATTTTATCACTCCATAGCCTTCATCGTTTACAGCTTGGAGCTTGCAAAGCCCTTACCAGCCTTACAACCAACACCCATCTTAAATCACTTAGTGAACTGGACGTGACAAGATGCTCAAGACTAAGAGAATTTTCGCTGACCTCAGAAAATTCTCTGTCTCCGTTGATGCTTTGTGGAGCAGCCATCAATGGTGAATTGTGCTCATCAAGCGGACATCTCAACAAAATTGATATTTTGAGCCTAAGAAGATCCGAAGGTGTGACAAGTCTTCACAAATTGGTTGACACACACACCCTTCGACGTCTTGATGCTGAGTATTGTAATAAGCTAGCATCAAATCTACGTTCCCTATTTGATGAGAGGCCGCATGCTTTGAAAATTCTACGGCTGGATTATTGTAGTGCATTATATGAAGTGCCTGACAACATTGAATTCTTGTCGTCATTACGTGAGTTACATCTCTCAAGCACTAATATAGAGACCTTGCCTTTGAGCATCAAAAGTCTTCCAAGCTTGCAACTTCTTTACTTACAACAATGCCGAAGGCTTCGGTCTCTACCACAACTCCCTCCCTCTATTCGTGAACTGTACGCCGATGTATGCCTGTCGCTTGAGACTTTACATTCACCTTTATTGACTGAAGATAGAGAAGGAAAACAATGTTATGTTGATCACTTCAGTTTCACAAATTGCATGGAGTTGGATGGGCAGTCAATCAAAGCTATTGAGGCCAAAGTGCTACTTGACATAAATAATAACAAAGCCAATGATTACTGGCCTACAATGAAATATCCGAGAGAAAGAGTTGCAGAGTGGTTCATGTATAAGACTACACGGTCTGTGGTGACTGTGGATCTTAGTTCAATTCCACAACCTTGGGATGGAACTTTCATTTTCCACGCCGTGTATTCTGGATCATTCCGTTGGGCACAGATTGATGTCGAATTGCGTATTGATGATCAATATGCTTGCAGGTCTAGAAGCAGGGGTGGGCTTCTAAGCTCAGATCATGTTGTTCTTTGGTACGATGCAGTGTCCTGTGAAGAGGTGCAAAGGACAATTAAAGAAAAGAAAAGAAAAGCTCCATTATTGCTTAAATTTCAATTCGCAGCCTTTCCGCCTCTTCATGATGGCACAACAATTGAGATCAAAGAGTGTGGGCTCTCCAGTTCAATTGATCTGCCCTCTTCAACTTCGTATATTACTCTCGCGCCTCTACCTCAAAATGATTGGAGGCCTTCTCCCGTAGTGTCTTTTGCCACCAGCGTTGATGGTTCTTTGGTCGCCGCGGCCTGTGAAGTCGGCTCCTTTGAGATTTGGCTTGTCTCCCCCGGCTCCGCCGGCAGGCACTGTCAGTTGGTTCCCGGTGCATTTAGCTTCCTGTATAAGAGTGACGTTATTAATACTGAAGCAGAGGCTGATCAAATGAGGAACGGATCATCTGAGCCTGATCAAGGTTATAATAGGGATAAGGATCGTGAAAGCGAAGAAGATTCTGAGTCACCCAACAGATGCCACCTTATACACATGGTGTCAGGGCTTTGA 3099 0.3998 MVYRNEAELVKEIVKDVKQKLRSRHPSEDHLKGLIGIRKRIADVESLLDKCSNNGGCQFIGIWGMGGLGKTTLANALFNKLHSTYEGSCFLTNVREKSKNEIHALREKIVWRLLGDKESHIGDAVDGYTESRLGQKKVFIVLDDVDDDEQLEKLVGSRKFGSGSKVLVTTRDKQVLRKKVDDINIHRLHGLDREEAGQLFSLNAFKKGSSDPKMKGLVENVTKYADGNPLALKVLGSLLNGINHKAWESQLDKLHKFPYPKINNILKLSFEGLDKEERNIFLHTACFFDFFHHYDVEDVKKMFNACGYSTEIALIRLEEKALLDIDERRIHMHHLIKEMGREIVQDQSLEAPQKGNILWISKNNSGILKDNMEKNAIEGWILNLSKVEEMHVIIEAFYSMPNLRFLEFYGNINGHFENALTFPCGMKFLPKNLMLLDWVGYPLKSLPATFNAESLVKINMPNSKLTKLWDGEQNLVNLRRINLSRSRDLIELPNFSKAIHLEEVDLEWCSKLQNVHPSILSLHSLHRLQLGACKALTSLTTNTHLKSLSELDVTRCSRLREFSLTSENSLSPLMLCGAAINGELCSSSGHLNKIDILSLRRSEGVTSLHKLVDTHTLRRLDAEYCNKLASNLRSLFDERPHALKILRLDYCSALYEVPDNIEFLSSLRELHLSSTNIETLPLSIKSLPSLQLLYLQQCRRLRSLPQLPPSIRELYADVCLSLETLHSPLLTEDREGKQCYVDHFSFTNCMELDGQSIKAIEAKVLLDINNNKANDYWPTMKYPRERVAEWFMYKTTRSVVTVDLSSIPQPWDGTFIFHAVYSGSFRWAQIDVELRIDDQYACRSRSRGGLLSSDHVVLWYDAVSCEEVQRTIKEKKRKAPLLLKFQFAAFPPLHDGTTIEIKECGLSSSIDLPSSTSYITLAPLPQNDWRPSPVVSFATSVDGSLVAAACEVGSFEIWLVSPGSAGRHCQLVPGAFSFLYKSDVINTEAEADQMRNGSSEPDQGYNRDKDRESEEDSESPNRCHLIHMVSGL 1032
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral1457g00003 1032 PRINTS Disease resistance protein signature 225 239 - -
Pral1457g00003 1032 PRINTS Disease resistance protein signature 59 74 - -
Pral1457g00003 1032 PRINTS Disease resistance protein signature 132 146 - -
Pral1457g00003 1032 PRINTS Disease resistance protein signature 543 559 - -
Pral1457g00003 1032 MobiDBLite consensus disorder prediction 990 1022 - -
Pral1457g00003 1032 Gene3D - 14 184 IPR027417 -
Pral1457g00003 1032 Gene3D Ribonuclease Inhibitor 368 567 IPR032675 -
Pral1457g00003 1032 Gene3D Ribonuclease Inhibitor 568 754 IPR032675 -
Pral1457g00003 1032 MobiDBLite consensus disorder prediction 1002 1022 - -
Pral1457g00003 1032 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 282 IPR027417 -
Pral1457g00003 1032 Pfam Leucine Rich Repeat 455 473 IPR011713 -
Pral1457g00003 1032 Gene3D - 190 274 IPR042197 -
Pral1457g00003 1032 SUPERFAMILY L domain-like 388 782 - -
Pral1457g00003 1032 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 565 IPR044974 GO:0006952
Pral1457g00003 1032 SUPERFAMILY "Winged helix" DNA-binding domain 261 363 IPR036390 -
Pral1457g00003 1032 Pfam NB-ARC domain 43 259 IPR002182 GO:0043531
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral1457g00003 Pral-Chr1457 21814 26703 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1457g00003 4 728 WRKY Transcription Factor Family AT4G12020 30.499 4.27e-75 270
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1457g00003 - - pcin:129290874 687.952