Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1454g00001 ATGGCAGATATTGTAGATGTGAGATCTGATCGTGGATGGATGTACACATCATGCAAACAATGTAGCAAGAAAGTGGTTCCAGATGGAAAAGGTTTCTTTTGTGAAAAGTGCCAAGCTATCGTAAAAGCTGTTATTCCCAGGTTCATGGTGGACTGTGAGATACTGGATGACACTGGATCATGTCATGTTGTAATTTTTGACCAAGAATTATCCAAACTGCTTGGATGTTCAGTAGCAGAGTTAAAGATATCTTGGAAGAGGTATTTGTTCAAGATACGTATTCCAGGAGATTATGTCAATGGGAATTCCAATGTGTGTGTAGCTACTCGGTTGACAAATGATAAAGCCATAACACAGTCTTTCTTGAGCACATCTTATGAAGACACTGCATCAGAGGGTTGTACTTCGTTGGTCTCACAGAAGAAAAGGTCTTTTGCTAATCAAACTGTGCATGCAAATTTCTTTGAATTATCAAAGTTTGACTCAACCTCTACATACCAAGTGGCAACTGCAATAGGCCCAGGTTTCAAAGCAATGAAGTCCATAGTAGAATCTAAAGTTGCAATTGTAAACACTGCCAATGTTGAGAAGGCAAACCCATTTGGTAATTTCCCATCAACTGATTGTCAAGTTGAGGTAAAGAGTAGCAAGCACAATGCTGGTTTCGTGGAAATCCCTTCTACTACATCTGGACATAATGGTGCGAAGAACGGTACTGAAAATATGTTAAATCATCCACTTGGTGGAAATCTTGAAGCTGATGAAAATAATACATCATTTGCAAGACGCCGCAGAGCAAAACACAAACAAATCTAG 816 0.3922 MADIVDVRSDRGWMYTSCKQCSKKVVPDGKGFFCEKCQAIVKAVIPRFMVDCEILDDTGSCHVVIFDQELSKLLGCSVAELKISWKRYLFKIRIPGDYVNGNSNVCVATRLTNDKAITQSFLSTSYEDTASEGCTSLVSQKKRSFANQTVHANFFELSKFDSTSTYQVATAIGPGFKAMKSIVESKVAIVNTANVEKANPFGNFPSTDCQVEVKSSKHNAGFVEIPSTTSGHNGAKNGTENMLNHPLGGNLEADENNTSFARRRRAKHKQI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1454g00001 271 CDD RPA1_DBD_C 1 105 IPR047192 -
Pral1454g00001 271 MobiDBLite consensus disorder prediction 224 271 - -
Pral1454g00001 271 Gene3D - 1 121 IPR012340 -
Pral1454g00001 271 SUPERFAMILY Nucleic acid-binding proteins 2 105 IPR012340 -
Pral1454g00001 271 MobiDBLite consensus disorder prediction 224 244 - -
Pral1454g00001 271 Pfam Replication factor-A C terminal domain 4 82 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1454g00001 Pral-Chr1454 7404 8599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1454g00001 7 101 Core DNA Replication Machinery Family AT5G61000 25.439 3.60e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1454g00001 - K07466 pcin:129299041 115.931