Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1450g00004 ATGGGGTCCCGGAGTAAGGAGGCGGACAAGCTGTTTGAGAGTGCTCCGGTGTGTTTTCCGGAGGGCCGCCCCATCCAGTGGGAGAGGACCACGGAGGTGGCCCCCGGCACCACAAAGGAAATGGTTTACCAACGGCATGACGACGTCGAGCAGATTGATTTGGGTCGGGTTCCGCCACCAGATTACCCGGACTACTCTTGGCCTTCCTCCACCAAACAGCAACCCAAGTATAGCGGTCCCATAAGAAAGAAGCGCAGCTCTTGGTCTTTGGACGAACACATATTGTTCCTGGTGGGAGTGGAGATACATGGGAAGGGAAAATGGAAGAAGATATCTGAAAACGTAGTGAGGACAAGAAGTGTAATGCAGGTGGCAAGCCATGCCCAAAAGTTTTATCTTCTCCAAAGTAAGAGAGACGCAAGAGTTAAGAGAAGAAAAGGAGGAATCAATGCTCTCACTTTAGAAAACATCTGCCCTCATTGTTTGAACCACATTCTTTCTTCAATTCCCTCACTGCATCATCATCATCATCACGTTCATTATGATGTTCCAGTGAATGATCAGTCATCTTCTTCAGGTCTTCGTCAATTGCAAGAGCCATATCACTGTGAACCTAACTCACAAGTTCATGAAGATGATCTTCCCATGCAGCATCAATCACTGGGAATGAATCAAAGCTACCAATCTGAGCAACATCAGTCCAAGCCACCACAAAGACCGGAGCTGATCAATCCTTAA 738 0.4783 MGSRSKEADKLFESAPVCFPEGRPIQWERTTEVAPGTTKEMVYQRHDDVEQIDLGRVPPPDYPDYSWPSSTKQQPKYSGPIRKKRSSWSLDEHILFLVGVEIHGKGKWKKISENVVRTRSVMQVASHAQKFYLLQSKRDARVKRRKGGINALTLENICPHCLNHILSSIPSLHHHHHHVHYDVPVNDQSSSSGLRQLQEPYHCEPNSQVHEDDLPMQHQSLGMNQSYQSEQHQSKPPQRPELINP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1450g00004 245 CDD SANT 87 131 IPR001005 -
Pral1450g00004 245 NCBIfam myb-like DNA-binding domain, SHAQKYF class 83 133 IPR006447 GO:0003677
Pral1450g00004 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 136 IPR017930 -
Pral1450g00004 245 Pfam Myb-like DNA-binding domain 85 130 IPR001005 -
Pral1450g00004 245 ProSiteProfiles SANT domain profile. 83 136 IPR017884 -
Pral1450g00004 245 MobiDBLite consensus disorder prediction 212 245 - -
Pral1450g00004 245 MobiDBLite consensus disorder prediction 49 82 - -
Pral1450g00004 245 Gene3D - 86 135 - -
Pral1450g00004 245 MobiDBLite consensus disorder prediction 204 245 - -
Pral1450g00004 245 SUPERFAMILY Homeodomain-like 81 137 IPR009057 -
Pral1450g00004 245 SMART sant 84 134 IPR001005 -
Pral1450g00004 245 PANTHER TRANSCRIPTION FACTOR KUA1 4 232 - -
Pral1450g00004 245 ProSiteProfiles Myb-like domain profile. 80 132 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1450g00004 Pral-Chr1450 41684 42552 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral1450g00004 Myb_DNA-binding 3.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1450g00004 - - csin:114261541 112.079