Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1450g00003 ATGGAGCAGTGGAATCGCGAGACGCACAAGCTTTTTGAGAACGCTCTCTTGAAGTATCCAGAGGAGCGTCCCGATCGTTGGGAGAGGATCGCCGATGAAATCCCTGGCGCCACCAAGGAAATGGTTCTGCAACGATATCAAGAGCTATTAGACGACCTGGCGGCGATCGAAGAAGACCGGGTGCCGATTCCGTCGGACGCAGACGATCCTGATGACTGGAAAATGAACGAATACAGAGGTGAACAAGGAACGAACGAAGAAAGAAGCAACAGTGCAGAAAGGGAAGAATGGATGGAGAAAAACAAGTTTGATTCAGAAGAAGATGAGGAAGACAAGTGCAGAGGCAAGGATAAAGAAGATAACTGA 366 0.4891 MEQWNRETHKLFENALLKYPEERPDRWERIADEIPGATKEMVLQRYQELLDDLAAIEEDRVPIPSDADDPDDWKMNEYRGEQGTNEERSNSAEREEWMEKNKFDSEEDEEDKCRGKDKEDN 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1450g00003 121 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Pral1450g00003 121 CDD SANT 4 50 IPR001005 -
Pral1450g00003 121 Gene3D - 1 63 - -
Pral1450g00003 121 MobiDBLite consensus disorder prediction 57 121 - -
Pral1450g00003 121 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
Pral1450g00003 121 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 85 IPR044636 GO:0003700
Pral1450g00003 121 Coils Coil 39 59 - -
Pral1450g00003 121 Pfam Myb-like DNA-binding domain 3 50 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1450g00003 Pral-Chr1450 35473 36145 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral1450g00003 Myb_DNA-binding 2.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1450g00003 - - twl:120006132 80.4925