Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1448g00005 ATGGCGGAAAGTCCGGTGTTGTTCTTACTGGACAAGTTGACCTCTTTACTGCAAGAAGAAGTTCAGCTTTTGAAGGGTGTTCGCACAGAGGTTCAGTTCATTAAAGATGAACTGGAGCGTCTCAAGGCCATCTTAAGAATGGCCGGTGCTTTGGAGGACAAAGACCCAGAACTCAAAGTCTGGGTGAAGCAAGTCAGAGATGTAGCTCATGACATGGAAGACGCCATTGATGACTTCACTATTCGCCTCGTGAATCATCATGGGCATGGCCACAATTCTGCTTTCAGAAGGTTTGCTTCAGCCATTAAAGCTCTCAGAGCTCGACATCGGATTGCTTCTGACTTGCAAGAGATCAAAGGCAGAGTCGAAAACATCTCCAAGGATCGTCGCAGCATAACTGAGACTGGGCCAAGCTCGAATCTTTTTCATAGATCGAGGCTTGATAGCCAAGGAGATGCACTTCTTCTTGAGGAAGCTGATCTTGTGGGTATTGAGAAGCCAAAGAAGCAGCTAATTGATTTGCTTTACCATGGGGAACAAGGAAAGGCGGTGATTCCAATCTATGGAATGGGAGGGCTGGGCAAAACCACAGTGGCAAAGCAGGTTTATGATGACCCAAAAGTGAAGAAGCGTTTTAAGATGCACGCTTGGGTCACAGTTTCTCAATCCTTCAAGATCAAATTCTGGTCAAAAAAAAAATCCTTCAAGATCAAAGAGCTTCTAAGAGACCTGGTTCAACAGCTTCATAAAGTTATTGGAAAACCAGCTCCTGCAGAAATTGGCTCAATGAAAAGTGACAATCTGAAGGAGTTGGTCAAGAGTCTGCTTCAACAAAGTAGATACCTCATCGTTCTGGATGACATATGGCGGGTAAATGCATGGGATGCTATCAAACTTGCTTTGCCTAACAATAACTATGGCAGTAGAATAATGATCACCACAAGAAACAAAGAGGTAGCACTTTCTTGCTGCACTGAGTTGCAAGGTAAGATCTATAACCTGGAATTCTTACCTCAGGATGAAGCATGGGCTCTTTTCTGTAAGAAAACATTTCAGGGTAATTCATGTCCTCCTCATTTGGAGGAGTCTTCTAAGAGTATCTTGAAAAGGTGTGGGGGGTTGCCTCTGGCAATTGTGGCTATCAGTGGTGCTTTGGCTACAAAAGACAGAAGCAACATAGAAGAATGGTCAGCTGTTAGCAAAAGTATGGCATCTGAAATTGAAAGCAATGACAAAATGGAGGATATGAACAAAGTGCTTTCTCTGAGTTTCAATGATTTGCCTTATTATCTCAAATCCTGTCTGTTGTACCTGATCATCTTTCCAGAATTTTATGCCATTGAGCATATGAGGTTGATTCGCTTGTGGATAGCTGAAGGGTTTGTCAATGGAGAAGAAGGAAGGACACTAGAAGAAGTTGCAGAAAGTTACCTGAAGGAGCTCTTGAACAGGAGTCTGATTCAAGTGGTAGAGAAAGGCAGTGATGGCAGGATGAAGACTTGTCGTGTTCATGACTTTCTACGGGACATCATCAATCTGAAGTCAAAAGATCAAAACTTTGCAACACTGGCCATGGACCAGGACATAATATGGCCAGAAAGAGTCCGTCGCTTATCAGTAATGAATAGTTTGCAGACCGTACAGCAAAATAGGACTTCATTTCAATTGCGTTCTCTCCTATTGTTTTCTTTAGCAGATTCAAATGATGACATCTGTTTATCTGGATTATTCTCAAAGGGTTGTAGGCTGCTTAAGGTGCTAGATCTGCAAGATGCACCTTTGGAGTCGTTTCCTGCTGAAGTTGTCAACCTTTACCACCTGAAGTATCTAAGCCTGAAGAATACCAAGGTAAAAAGTATTCCAGGCTCCATTAAGAAACTTCAAAACCTGGAGACATTAAATCTCAAACACTCCTATGTCACGGAATTGCCAGTTGAAATATTGGAGCTGCAACGACTACGCCATCTCCTGGTGTATCGTTATGAGATTGAATCCTATGCTCATTTCCTCTCAAGGCATGGCTTCAAGCTGCCTGGTCCAATAGGATGCATGCAATCTCTGCAAACTTGTTTCATAGAGGTAGACCAAGGAAGTCAAGACTTGATGGTTGAGCTTGGAAAGCTGACTCAACTCAGAAGGCTGGGCATAAGAAAGCTGAAGAAAGAAGATGGGGCTGCTTTGTGCTCATCCATTCAGAAAATGACAAATCTGAGGTCTCTATCCATAACTGCAGTAGAAGATGATGAGATCATTGACATTCAAAACATTGCCAAGCCTCCTCCATACCTGAGACAACTGTACTTATGTGGACGTTTAGAGAAGTTTCCTGAATGGATACCCTCCCTCCAGAATCTAGTCAGAGTGTATTTGAAATGGAGCAGGTTAGAGGAGGATCCTCTGGTGTATCTTCAAGATCTCCCAAATCTAATTCATCTTGAGTTCTTACAGGTTTATGTTGGTGAGACACTGCATTTCAAGGCAGAGAAATTCCCAAGTCTGAAACTTTTAGGCCTTGATGATATGGATGGATTGAAATCCATGATGGTGGAGGAAGGAGCAATGCCAAATCTAAAAAGACTGATCATCCAGAGATGTGGATCATTGAAGAAGGTACCCTCAGGTATAGAACATTTGAGTAAGCTAAAAGCAATTGACTTCTTTGATATGCCTGATGAATTGATCAATGCACTAAGTCCAAATGGAGGTAGCGATCATTGGAGAGTAGAACATGTACCTGCGGTTTATTCAACCTACTGGAAATCTGGTACATGGGATGTCTACTCAGTGGATACTTTTGGGGAGAGAGACAGTTCTTCAAGTAATAATGTTGCAATGAAAAGTCATGAGCGTCGTATACTTTGGAAGGTTTAA 2871 0.4242 MAESPVLFLLDKLTSLLQEEVQLLKGVRTEVQFIKDELERLKAILRMAGALEDKDPELKVWVKQVRDVAHDMEDAIDDFTIRLVNHHGHGHNSAFRRFASAIKALRARHRIASDLQEIKGRVENISKDRRSITETGPSSNLFHRSRLDSQGDALLLEEADLVGIEKPKKQLIDLLYHGEQGKAVIPIYGMGGLGKTTVAKQVYDDPKVKKRFKMHAWVTVSQSFKIKFWSKKKSFKIKELLRDLVQQLHKVIGKPAPAEIGSMKSDNLKELVKSLLQQSRYLIVLDDIWRVNAWDAIKLALPNNNYGSRIMITTRNKEVALSCCTELQGKIYNLEFLPQDEAWALFCKKTFQGNSCPPHLEESSKSILKRCGGLPLAIVAISGALATKDRSNIEEWSAVSKSMASEIESNDKMEDMNKVLSLSFNDLPYYLKSCLLYLIIFPEFYAIEHMRLIRLWIAEGFVNGEEGRTLEEVAESYLKELLNRSLIQVVEKGSDGRMKTCRVHDFLRDIINLKSKDQNFATLAMDQDIIWPERVRRLSVMNSLQTVQQNRTSFQLRSLLLFSLADSNDDICLSGLFSKGCRLLKVLDLQDAPLESFPAEVVNLYHLKYLSLKNTKVKSIPGSIKKLQNLETLNLKHSYVTELPVEILELQRLRHLLVYRYEIESYAHFLSRHGFKLPGPIGCMQSLQKXCFIEVDQGSQDLMVELGKLTQLRRLGIRKLKKEDGAALCSSIQKMTNLRSLSITAVEDDEIIDIQNIAKPPPYLRQLYLCGRLEKFPEWIPSLQNLVRVYLKWSRLEEDPLVYLQDLPNLIHLEFLQVYVGETLHFKAEKFPSLKLLGLDDMDGLKSMMVEEGAMPNLKRLIIQRCGSLKKVPSGIEHLSKLKAIDFFDMPDELINALSPNGGSDHWRVEHVPAVYSTYWKSGTWDVYSVDTFGERDSSSSNNVAMKSHERRILWKV 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1448g00005 957 Pfam NB-ARC domain 165 425 IPR002182 GO:0043531
Pral1448g00005 957 Pfam Leucine rich repeat 583 637 IPR001611 GO:0005515
Pral1448g00005 957 Gene3D - 337 423 IPR042197 -
Pral1448g00005 957 Gene3D Ribonuclease Inhibitor 695 894 IPR032675 -
Pral1448g00005 957 SUPERFAMILY L domain-like 503 893 - -
Pral1448g00005 957 Coils Coil 24 44 - -
Pral1448g00005 957 Gene3D Ribonuclease Inhibitor 536 690 IPR032675 -
Pral1448g00005 957 Pfam Rx N-terminal domain 7 96 IPR041118 -
Pral1448g00005 957 CDD RX-CC_like 2 127 IPR038005 -
Pral1448g00005 957 PANTHER DISEASE RESISTANCE PROTEIN RP 31 870 IPR044974 GO:0006952
Pral1448g00005 957 Gene3D - 6 112 - -
Pral1448g00005 957 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 438 IPR027417 -
Pral1448g00005 957 Gene3D - 424 515 IPR036388 -
Pral1448g00005 957 FunFam Probable disease resistance protein At1g63360 424 513 - -
Pral1448g00005 957 PRINTS Disease resistance protein signature 275 289 - -
Pral1448g00005 957 PRINTS Disease resistance protein signature 184 199 - -
Pral1448g00005 957 PRINTS Disease resistance protein signature 371 385 - -
Pral1448g00005 957 PRINTS Disease resistance protein signature 625 641 - -
Pral1448g00005 957 Gene3D - 150 328 IPR027417 -
Pral1448g00005 957 FunFam Probable disease resistance protein At1g61300 152 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1448g00005 Pral-Chr1448 47299 50535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1448g00005 184 638 WRKY Transcription Factor Family AT5G45050 22.340 2.11e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1448g00005 K13457 - gmx:100305458 1354.35