Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1442g00002 ATGGCTGTAAATGAACATACCGAACGAGAATATGTGCCTCAGAAAGAGAAGCAATCTTCAGAGGAAGAGAAGAGGAAGAAGAAAATTGTACCTGGGAGTTTGATGAAAGCTGTAGTGAGGCCTGGAGGGGGTGACTTGACGCCTTCAGATGGTGATCAGATCGTATATCATTGCACAATTCGAACTTTAGATGGAGTAGTTGTGCAATCCACCCGATCAGAATGCGGAGGGAAGGGTGCCCCGATGAGAGATGTATTGGGCAAAAGCAAGATGTTATTGGGTTTGTTAGAAGGAATTCCAACAATGTTGAAGGGTGAAGTAGCAATGTTCAAGATGAAACCTCAGTTGCATTATGGTGAGGATGATTGTCCTATTTCTGCTCCTGATGGGTTTCCAAAGGAAGACGAACTTCATTTTGAAATTGAGCTGATAGATTTTTTCAAAGCCAAGGTTGTTACTGATGACTTGGGAGTTATAAAAAAGGTGATATGTGAAGGACAGGGTTGGGAATCTCCACGAGAACCTTATGAAGTGAAAGCTTGGATATCAGCAAAGACAGTTGCGGGGAAGTTGATTGTGTCCCACACAGAAGGAGAACCTTATTTCTTTACTTTTGGAAAATCAGAGGTACCTAAAGGTCTTGAAATGGGAATAGGAACAATGACACGGGAAGAGAAGGCTGTAATATTTGTTCGTAGTCAGTACCTAACTCAGTCTCCTTTGATGCCACTGAATGAAGACTATGAAGAAGTTGAGTTTGAAGTAGAGCTTGTCCACTTTATTCAAGTTAGAGACATGCTTGGAGATGGCCGCCTAATAAAACGGCGTATTCGTGATGGGAAAGGTGATTTTCCAATGGACTGCCCTCTTCATGACAGTCTACTTCGTGTTCATTACAAGGGTATGGTTCTTGATGAAGAAAAGAGGGTATTCTATGACACAAGAGTCGATAATGATGGTCAACCACTGGAGTTCTGTTCTGGAGAAGGGCTTGTGCCAGAGGGGTTTGAAATGTGTGTACGTCTGATGCTGCCTGGAGAGGTGGCTCTCGTCACTTGCCCCCCAGACTTTGCTTATGATAAGTTTCCTAGGCCGGCAAATGTTCCTGAGGGTGCTAATATTCAATGGGAAATTGAGCTTCTTGGTTTTGAAATGCCAAAGGACTGGACTGGATTTGACTTCAAAAGTATAATGGATGATGCTGAAAAGATCAGAAACACGGGTAACAGGCTGTTCAAAGAAGGAAAATATGAACTTGCCAAGGCAAAGTATGAAAAGTTACTTCGAGAATTTAATCATGTCAATCCACAAGATGATGAGGAAGGAAAAGTATTTTCAGATACGCGTAATATGTTACACCTGAATGTGGCTGCTTGCTATCTGAAACTGGGAGAAATTAGAAAGTCCATTGAATTTTGCAATAAGGTTCTGGATGCAAACCCTGCGCATGTCAAGGGTCTTTACCGTCGTGGAATGGCCTACATGGCAGCTGGAGATTTTGAAGAAGCAAAGAATGATTTCAACATGATGCTGAAAGTTGACAAGTCAACCGAACCTGATGCAACAGCAGCTCTTCTTAAACTGCAGCAGAAGGAGCAGGAAGCTGAGAAGAAAGCTCGAAAGCAATTTAAAGGCCTTTTTGACAAGAAACCTGGAGAAATCGCTGAAGTCGCTGTCGAAGAGGATAAAGATCCGAAGACAAGTAAAAGCAAGGAGGAGGATGAAGGACGTGGAGATTCTGATGGGAGGAGCTCATCTGAGGATTCGCATGAAGTTGCACCTGATGATGTCCCTCAAAGGGGGTGGTTCTCTCGCTTTTGGCCAAGCAGATTATTACCATCCTTTTGGATTCGACGATGTACCATTCTGTGA 1872 0.4311 MAVNEHTEREYVPQKEKQSSEEEKRKKKIVPGSLMKAVVRPGGGDLTPSDGDQIVYHCTIRTLDGVVVQSTRSECGGKGAPMRDVLGKSKMLLGLLEGIPTMLKGEVAMFKMKPQLHYGEDDCPISAPDGFPKEDELHFEIELIDFFKAKVVTDDLGVIKKVICEGQGWESPREPYEVKAWISAKTVAGKLIVSHTEGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIFVRSQYLTQSPLMPLNEDYEEVEFEVELVHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLHDSLLRVHYKGMVLDEEKRVFYDTRVDNDGQPLEFCSGEGLVPEGFEMCVRLMLPGEVALVTCPPDFAYDKFPRPANVPEGANIQWEIELLGFEMPKDWTGFDFKSIMDDAEKIRNTGNRLFKEGKYELAKAKYEKLLREFNHVNPQDDEEGKVFSDTRNMLHLNVAACYLKLGEIRKSIEFCNKVLDANPAHVKGLYRRGMAYMAAGDFEEAKNDFNMMLKVDKSTEPDATAALLKLQQKEQEAEKKARKQFKGLFDKKPGEIAEVAVEEDKDPKTSKSKEEDEGRGDSDGRSSSEDSHEVAPDDVPQRGWFSRFWPSRLLPSFWIRRCTIL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1442g00002 623 FunFam Peptidylprolyl isomerase 389 545 - -
Pral1442g00002 623 SUPERFAMILY FKBP-like 13 150 - -
Pral1442g00002 623 SUPERFAMILY FKBP-like 250 383 - -
Pral1442g00002 623 SUPERFAMILY FKBP-like 150 260 - -
Pral1442g00002 623 Gene3D - 150 261 IPR046357 GO:0003755
Pral1442g00002 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 51 147 IPR001179 GO:0003755
Pral1442g00002 623 MobiDBLite consensus disorder prediction 554 601 - -
Pral1442g00002 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 144 IPR001179 GO:0003755
Pral1442g00002 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 176 258 IPR001179 GO:0003755
Pral1442g00002 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 293 381 IPR001179 GO:0003755
Pral1442g00002 623 FunFam Peptidylprolyl isomerase 8 150 - -
Pral1442g00002 623 Gene3D - 262 385 IPR046357 GO:0003755
Pral1442g00002 623 Gene3D - 2 149 IPR046357 GO:0003755
Pral1442g00002 623 MobiDBLite consensus disorder prediction 554 595 - -
Pral1442g00002 623 Coils Coil 521 541 - -
Pral1442g00002 623 ProSiteProfiles TPR repeat profile. 450 483 IPR019734 GO:0005515
Pral1442g00002 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 384 IPR001179 GO:0003755
Pral1442g00002 623 Pfam Tetratricopeptide repeat 485 514 IPR013105 -
Pral1442g00002 623 FunFam Peptidylprolyl isomerase 262 386 - -
Pral1442g00002 623 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Pral1442g00002 623 SMART tpr_5 484 517 IPR019734 GO:0005515
Pral1442g00002 623 SMART tpr_5 450 483 IPR019734 GO:0005515
Pral1442g00002 623 SMART tpr_5 401 434 IPR019734 GO:0005515
Pral1442g00002 623 MobiDBLite consensus disorder prediction 1 28 - -
Pral1442g00002 623 FunFam Peptidylprolyl isomerase 151 261 - -
Pral1442g00002 623 Pfam Tetratricopeptide repeat 454 483 IPR019734 GO:0005515
Pral1442g00002 623 SUPERFAMILY TPR-like 398 540 IPR011990 GO:0005515
Pral1442g00002 623 PANTHER INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 150 262 - -
Pral1442g00002 623 Gene3D Tetratricopeptide repeat domain 395 549 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1442g00002 Pral-Chr1442 6211 17221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1442g00002 47 549 Calmodulin-binding Proteins AT5G48570 30.814 2.39e-62 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1442g00002 - - gmx:100818201 1014.22