Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1440g00004 ATGAACTTTAAGAATGTGAAGAACGACCCTGCGGTCGATAACAGCAGTGGCGGAAGGCAACCAGTGAACTTTTCCCTGGCACGACAGCCGTCCGTCTACTCTCTGACATTTGACGAATTCATGAGTACCATGGGAGGTCCTGGAAAGGACTTTGGGTCCATGAACATGGATGAGTTGCTCAAGAACATTTGGACAGCTGAAGAAATGCAAACAATGGCGTCCGCCGGCTTTGTTCAACCGGTGACCGGTACCTCTGGTGATGGCCATTTGCAGAAACAAGGATCGTTGACACTGCCACGGACAATTAGCCAGAAGACAGTGGATGAAGTCTGGAAGGATATTTCCAAGTACGGGATTGCTACTGGTCCTGGAGGCCCCAGTTTTCCTCAGAGGCAGCAGACTCTGGGAGAGATGACGCTGGAGGAGTTCTTGGTCAGAGCCGGCGTGGTCAGAGAAGATATACAATTAGATGAAAAGCCAAACGGGGGGCTTTTCGCCGATTTGTCTCGGACAGGGAATCATGGTGGTTTAGAGATGGGTTCTCCGCAATTCAACAAGGGTGCAGGGTTAGTAGGAGGCCCGATTCCCGGCAATAACAACGATCGTCTAACTCTTCAATCGTCAACCAATTTGCCGTTCAATGTTAACGGGATTAGATCGAATCATCAACAGTTGCCTACTTCACAGCCACCGCAGCTGCAACCGCAGATACTTCCAAAGCAACCTGCTATGTCTTATGCAGCTCCAGTGCCATTAATGAGCAATCAAGGAATCAAGAGCGGAATAGTGGGACTTGCTGATCAGAATCTAAAGGCCAATATAGTTCCGGGTTCTGCACTGCAAGGTGGAGGGATCGATGGTATGGGTTTCGGACATGGGGGTGTTCATGTAGCTACAAGATCCCCAGCGAATCAACTGTCTTGCGATGAAACTGGGAAGATTAACGGGGATACTTCGTCAGTATCGCCAGTTCCTTATGTATTCAATGGTGGTTTAAGGGGAAGAAAGCGCAGTGGAGCTGTGGAGAAGGTAATTGAAAGGAGGCAGAGAAGAATGATAAAGAATAGAGAATCAGCTGCTAGGTCGAGGGCTCGCAAGCAGGCATATACCACGGAACTGGAAGCAGAAGTTAAAATGTTAAAAGATGAAAACCAAGAACTTCGAAGGAAGCAGGCTGAAATCATGGAAATTCGAAAAAAACATATTATGGAGATGATAAATACGCAACAAGCAGTCAAGAGAAGATGCTTGAGACGAACTCAAACTGGACCATGGTAG 1278 0.4773 MNFKNVKNDPAVDNSSGGRQPVNFSLARQPSVYSLTFDEFMSTMGGPGKDFGSMNMDELLKNIWTAEEMQTMASAGFVQPVTGTSGDGHLQKQGSLTLPRTISQKTVDEVWKDISKYGIATGPGGPSFPQRQQTLGEMTLEEFLVRAGVVREDIQLDEKPNGGLFADLSRTGNHGGLEMGSPQFNKGAGLVGGPIPGNNNDRLTLQSSTNLPFNVNGIRSNHQQLPTSQPPQLQPQILPKQPAMSYAAPVPLMSNQGIKSGIVGLADQNLKANIVPGSALQGGGIDGMGFGHGGVHVATRSPANQLSCDETGKINGDTSSVSPVPYVFNGGLRGRKRSGAVEKVIERRQRRMIKNRESAARSRARKQAYTTELEAEVKMLKDENQELRRKQAEIMEIRKKHIMEMINTQQAVKRRCLRRTQTGPW 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1440g00004 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 350 365 IPR004827 GO:0003700|GO:0006355
Pral1440g00004 425 Pfam bZIP transcription factor 347 400 IPR004827 GO:0003700|GO:0006355
Pral1440g00004 425 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 425 IPR043452 GO:0003700|GO:0045893
Pral1440g00004 425 Coils Coil 366 400 - -
Pral1440g00004 425 SUPERFAMILY Leucine zipper domain 347 394 IPR046347 GO:0003700|GO:0006355
Pral1440g00004 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 345 396 IPR004827 GO:0003700|GO:0006355
Pral1440g00004 425 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 345 404 - -
Pral1440g00004 425 MobiDBLite consensus disorder prediction 1 23 - -
Pral1440g00004 425 CDD bZIP_plant_BZIP46 347 394 - -
Pral1440g00004 425 Gene3D - 345 401 - -
Pral1440g00004 425 SMART brlzneu 343 407 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1440g00004 Pral-Chr1440 22142 25967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1440g00004 26 425 bZIP Transcription Factor Family AT1G49720 46.117 5.42e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral1440g00004 bZIP_1 2.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1440g00004 K14432 - qsa:O6P43_018931 544.658