Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1439g00011 ATGTACAAATGTAATAGTTTTCTCGATCACGGGCTTTCAAAGCAGTTCTTGAACTATACAGGATGTGTTAAGAGTAATAATGAGACCATCTTTTTCGAAACGCAAGATCAAGACGATCCTCCACTTTCTTTAGCAACATATTCAAGGGTTCAGCTTCCAGTGAATAAGCTGGCTTTCTCTGCCGATCCCTTTACATTCATAGCCCCTGAATTCATTGTTAGCATTCAACTCTCTCAAGACTGTAGTTTTGGGGTCATTGTACTAGCGTTGGTGCTCCTTTTCTGGCACCACAAACAAAAACAGAAACATGTCAGGCTACGATCAGCGAGTCAATACCCAAATGATGCAGATCCAGATAGTGGCAGAGTCTTCTTCGGAGTCCCAATCTTCTCCTACGTGGAGCTTCAAGGGGCAACCAAGAACTTTGACTCCTCCAACAAACTTGGAGATGGAGGATTCGGCTCTGTTTACTATGGGAAGTTTCAAGATGGGCGTGAAGTTGCAGTGAAACACTTATTCAACCACAACTACAAGCCAGTGGAACAGTTCATGACCGAAGTTGAGATCCTCACTCGCCTACCTCATAGAAATCTTGTCTGCCTCTATGGCTGCACTTCACGTCAGAGCCATGAGCTCCTTCTTGTCTATAAATACATCCCAAATGGCACCCTTGCCAGTCACCTACGTGGCAGCTCAACAAATCCTGCATTGCTGACATGGCCTATTCGAATCAAAATCGCTATAGAGACTACCAGTGCTTTGGCTTACCTTCATGCTTCCAGCATCATCCACCCACCACAAGGAACACCAGGCTATATTGATCCCCAGTATCACTTTTGCTTTAGGCTAACAAACAAAAGTGATGTGTATATTTTTGGGGTTGTGCTTATAGAGTTGGTATCTTCAATGGTAGCAGTTGATATGGGAAGGAACAGAGATGAGATTACACTGGGGAGTCTTGCAATAGATAAGGAGACGAGGCCCTCCATTGATGAGGTTTTAGAGATTTTAATGAAAATTGAGAATGGGAACAAAGAAGACAAGAATGCGGGGGGAAATGGTGATGGTGGTGAAAGTTCAAAAAATAAAGCAGATATACATGCAAGACCAGTGACTTCACTAAGCTTTGATCAGGCAAAGTTGCTCAAGTCAGCAACTTCACAAAACGATGCGATTGAGAGATGGGGAAAGGGAGAAGTTGATCAGGCAAAGTTGTTTAGCATCTAA 1227 0.4336 MYKCNSFLDHGLSKQFLNYTGCVKSNNETIFFETQDQDDPPLSLATYSRVQLPVNKLAFSADPFTFIAPEFIVSIQLSQDCSFGVIVLALVLLFWHHKQKQKHVRLRSASQYPNDADPDSGRVFFGVPIFSYVELQGATKNFDSSNKLGDGGFGSVYYGKFQDGREVAVKHLFNHNYKPVEQFMTEVEILTRLPHRNLVCLYGCTSRQSHELLLVYKYIPNGTLASHLRGSSTNPALLTWPIRIKIAIETTSALAYLHASSIIHPPQGTPGYIDPQYHFCFRLTNKSDVYIFGVVLIELVSSMVAVDMGRNRDEITLGSLAIDKETRPSIDEVLEILMKIENGNKEDKNAGGNGDGGESSKNKADIHARPVTSLSFDQAKLLKSATSQNDAIERWGKGEVDQAKLFSI 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1439g00011 408 Gene3D Phosphorylase Kinase; domain 1 116 218 - -
Pral1439g00011 408 Gene3D Transferase(Phosphotransferase) domain 1 219 265 - -
Pral1439g00011 408 ProSitePatterns Protein kinases ATP-binding region signature. 148 170 IPR017441 GO:0005524
Pral1439g00011 408 ProSiteProfiles Protein kinase domain profile. 142 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1439g00011 408 SUPERFAMILY Protein kinase-like (PK-like) 120 341 IPR011009 -
Pral1439g00011 408 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 266 324 IPR044652 GO:0004672
Pral1439g00011 408 Gene3D Transferase(Phosphotransferase) domain 1 266 359 - -
Pral1439g00011 408 Pfam Protein tyrosine and serine/threonine kinase 145 264 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1439g00011 Pral-Chr1439 115975 117994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1439g00011 85 335 Receptor kinase-like Gene Family AT1G25390 50.859 2.53e-89 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral1439g00011 PK_Tyr_Ser-Thr 4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1439g00011 - - aprc:113871894 323.553