Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1439g00010 ATGAGACCATCTTCTTCAGCACGCAAGATGAAGATGATCCTCCATCTTCTTTGGCAGCATGTCCAAGGGTTCAGTGTTCAGCTTTCTCCTGCTTGTGATCAATGTCGTCATTTTGAGAAAGGCTTATGCCGGCTCAACAGCACCGGAGGATTTTATTGTCTCAAATTTAAAGGTTTTGGAGCAGGATTAGGCATTCTGTTGTTAGCTTTGCTGCTCTGTTTCGGACTCTACAAGCACAAACAGAATGCTGTGTCCCATGTCAGATTCCGATCATCAAATCAATACCCAAGTGATGCAGACCCAGACAGTGGCAGACTCTTCTTTGGAGTCCCAATCTTCTCCTACACGGAGCTTCAAGGCGCAACCAATAACTTTGACCCTTCCAACAAACTGGGAGACGGAGGGTTCGGCTCTGTTTTCTATGGGAAGCTTCAAGATGGGCGTGAAGTTGCAGTGAAACACCTATTCAACCACAACTACAAGCGAGTGGAACAGTTTATGACTGAAGTTGAGATCCTCACTCGCCTGCGTCACAAAAATCTTGTCTGTCTCTATGGCTGCACTTCGCGTCAGAGCCGTGAGCTCCTTCTTGTCTACGAATACATCCCAAATGGCACCCTTGCCAGTCACCTACGTGGCAGCTTTGCAAATCCTGCGTTGCTGACTTGGCCTGTTCGAATCAAAATCGCCATAGAAACTGCCAGTGCTTTGGCTTACCTTCATGCTTCCGGCATCATCCATCGTGACGTCAAAACCAACAACATTCTCCTTGACAAGAACTTCTGTGTTAAGGTTGCAGATTTTGGACTTTCTAGGTTGTTCCCAAATGATGTCTCGCATGTTTCTACGGCTCCACAAGGAACACCAGGCTATCTTGATCCAGAATATTACTATTGCTTTAGGCTGACCGATAAAAGTGATGTGTATAGTTTTGGGGTTGTGCTTATGGAGCTGATATCTTCAATGCCAGCAGTTGATATGAGAAGGAACAAAGATGAGATTACATTGGCGGGGCTTGCAGTTAGGAAAATTCAGAGGAATGAATTTGTGGAGCTGGTGGATCCATGTTTGGGGATTGAGAAGGATGGTGAGGTGATGAAGAAGGTGGTTGCAATGGGAGAATTGGCATTTCAGTGTTTGCAGATAGATAAGGAGATGAGGCCTTCCATTGATGAGGTTTTAGAGGTTTTGAGGAAAATCGAAGGTGGTAAAGAAGAAGAGGATGCAGTGAAAGACGGAGATGGAGGTGAAGTTTTAAAGAATAAAGCAGATATACAAGCACGAGCAGTGACTTCAATAAGCTTTGATCAGGGAAAGTTGTTCAAGTCAGCATCTTCTCCAAAGGACATGATCCAGAAATGGGCAAATGGAAAATTTGATCAAGCAAAGCTGTTTAGCGTTTAA 1404 0.4473 MRPSSSARKMKMILHLLWQHVQGFSVQLSPACDQCRHFEKGLCRLNSTGGFYCLKFKGFGAGLGILLLALLLCFGLYKHKQNAVSHVRFRSSNQYPSDADPDSGRLFFGVPIFSYTELQGATNNFDPSNKLGDGGFGSVFYGKLQDGREVAVKHLFNHNYKRVEQFMTEVEILTRLRHKNLVCLYGCTSRQSRELLLVYEYIPNGTLASHLRGSFANPALLTWPVRIKIAIETASALAYLHASGIIHRDVKTNNILLDKNFCVKVADFGLSRLFPNDVSHVSTAPQGTPGYLDPEYYYCFRLTDKSDVYSFGVVLMELISSMPAVDMRRNKDEITLAGLAVRKIQRNEFVELVDPCLGIEKDGEVMKKVVAMGELAFQCLQIDKEMRPSIDEVLEVLRKIEGGKEEEDAVKDGDGGEVLKNKADIQARAVTSISFDQGKLFKSASSPKDMIQKWANGKFDQAKLFSV 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1439g00010 467 Gene3D Transferase(Phosphotransferase) domain 1 202 423 - -
Pral1439g00010 467 ProSitePatterns Protein kinases ATP-binding region signature. 131 153 IPR017441 GO:0005524
Pral1439g00010 467 Pfam Protein tyrosine and serine/threonine kinase 129 396 IPR001245 GO:0004672|GO:0006468
Pral1439g00010 467 ProSiteProfiles Protein kinase domain profile. 125 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1439g00010 467 Gene3D Phosphorylase Kinase; domain 1 100 201 - -
Pral1439g00010 467 CDD STKc_IRAK 131 400 - -
Pral1439g00010 467 SUPERFAMILY Protein kinase-like (PK-like) 105 397 IPR011009 -
Pral1439g00010 467 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 22 454 IPR044652 GO:0004672
Pral1439g00010 467 FunFam Wall-associated receptor kinase-like 20 202 410 - -
Pral1439g00010 467 SMART serkin_6 125 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1439g00010 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Pral1439g00010 467 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 108 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1439g00010 Pral-Chr1439 85428 87351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1439g00010 58 406 Receptor kinase-like Gene Family AT1G25390 59.155 1.52e-141 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral1439g00010 PK_Tyr_Ser-Thr 6.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1439g00010 - - gmx:100789176 489.189