Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1439g00008 ATGGTTCTACGTTTTCATTTGGTCGTCTTCTTCTTGCTCGCTAACCATTCTACTTCTGAAGAGTGCCCACGTGTCTTTGAATGTGGGGATCTGGGCAACCTCTCGTTCCCTTTAACTACTCAACGACGCAAAAACTGTGGAATGTTGCCGATTCATGGCTGTGAAGACCCCAACGCTCAAAAAATAGTGTATTTTGGAAAGAAGGAGTTTCAAGTGACACAAATGGGGCCTTTCAAGAATATTATCGTTAGAGACGCAAGATTGCAGCAGAGTTTGGTAAATGATAGATGTGATGCCTTGTGCTGCAATATTACTCTTCCTCCCAGCTCACCCTTGGGTTCTTTTGATATCTTTCCATACGCAAAAACCTTTTACAAATGTAATATTAGTCTCAGAGTTAGCCCTCCAAAGCAGGTGTTGAACTATACAGGATGTCGTAAGAGTAATAACGAGACCATCTTCTTCCGAACGCAAGATCAAGTTGATCCTCCATCTTCTATAGCAACATGTCCAAGGGTTCTGCTTCCAGTAAATATGCTAGCTTTCTCTCCTGATCCTTTTACATTCATAGCTTCTGAATTCCCCGTTAACATTCGACTTTCCGATGACTGTGATCGATGTTCTAAGCACAACAAAGGCATATGCCTTCTTGACGGTAAAGGAGCATTTTATTGCTCCAAATTCAAAGAGGATCAAAATAAAATACGGGCTTGGAAGCTGGGATTGATAATCGGCTTTGGAGTGGGGCTAGGAATTCTGATATTAGCGTCGCTGCTCTGCTTCGGACACTACAAAAAGAAGCAGAATGCTGTGTCCCACGTCAGACTCCGGTCAACAAATCAGTACCCAAATGATGCAGACCCAGACAGTGGCAGACTCTTCTTTGGAGTGCCAATCTTCTCCTACATGGAGCTTCAAGGCGCAACGAACAACTTCAACCCCTCCAACAAACTTGGAGACGGAGGCTTCAGCTCTGTTTACCATGGTAAGCTTCCAGATGGGCGTGAAGTTGCAGTGAAACACCTATTCAGCCACAACTACAAGCGAGTAGAACAGTTCATGACTGAAGTTGGGATCCTCACTCACCTGCGTCACAGAAACCTTGTCTTTCTCTATGGCTGCACTTCACGCCAGAGCCGTGAGCTCCTCCTTGTCTATGAATACATCTCAAACGGAACCCTTGCTAGTCACCTTCATGGCAGCTCTGCAAATCCTACATTGTTGACATGGCCTATTCGAACCAAAATCGCTATAGAAACTGCTAGTGCTTTGTCTTATCTTCATGCCTCTGGCATTATCCACCGTGACGTCAAAACCAACAATATTCTCCTTGACAAGAACTTTTGTGTTAAGGTTGCTGATTTTGGACTTTCTAGGTTATTCCCAGATGATGTTTCACATGTTTCTACGGCTCCACAAGGAACACCAGGCTATCTTGACCCAGAATATCATTATTGCTTTAGGTTGACTGATAAAAGTGATGTGTATAGTTTTGGAGTTGTGCTTATGGAGCTAATATCTTCAATGCCAGCGGTTGATATGGGAAGGAAGAAAGATGAGATTACATTGGCAGGTCTTGCAGTTAGGAAGATTCAAAGGAATGAATTTGATGATCTGGTGGATCCATGTTTGGGGCTTGAGAAGGATAGTGAGGTGAAGAAGAAGGTAGTTGCAGTGGGAGAATTGGCATTTCAGTGTTTGCAGATAGATAAGGAAATGAGGCCTTCCATTGATGAGGTTTTAGAGGTTTTGAGGAAAATCGAAGGTGGGAAAGAAGAAGAAGAGGATACAGGAAAAGACGGAGATGGTGATGAAGTTTCAAAGAATAAAGCAGATATACAAACACGAGCGATGACTTCAATAAGCTTTGATCAAGACAATATGATCCAGAAATGA 1896 0.4309 MVLRFHLVVFFLLANHSTSEECPRVFECGDLGNLSFPLTTQRRKNCGMLPIHGCEDPNAQKIVYFGKKEFQVTQMGPFKNIIVRDARLQQSLVNDRCDALCCNITLPPSSPLGSFDIFPYAKTFYKCNISLRVSPPKQVLNYTGCRKSNNETIFFRTQDQVDPPSSIATCPRVLLPVNMLAFSPDPFTFIASEFPVNIRLSDDCDRCSKHNKGICLLDGKGAFYCSKFKEDQNKIRAWKLGLIIGFGVGLGILILASLLCFGHYKKKQNAVSHVRLRSTNQYPNDADPDSGRLFFGVPIFSYMELQGATNNFNPSNKLGDGGFSSVYHGKLPDGREVAVKHLFSHNYKRVEQFMTEVGILTHLRHRNLVFLYGCTSRQSRELLLVYEYISNGTLASHLHGSSANPTLLTWPIRTKIAIETASALSYLHASGIIHRDVKTNNILLDKNFCVKVADFGLSRLFPDDVSHVSTAPQGTPGYLDPEYHYCFRLTDKSDVYSFGVVLMELISSMPAVDMGRKKDEITLAGLAVRKIQRNEFDDLVDPCLGLEKDSEVKKKVVAVGELAFQCLQIDKEMRPSIDEVLEVLRKIEGGKEEEEDTGKDGDGDEVSKNKADIQTRAMTSISFDQDNMIQK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1439g00008 631 SMART serkin_6 312 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1439g00008 631 SUPERFAMILY Protein kinase-like (PK-like) 290 587 IPR011009 -
Pral1439g00008 631 Gene3D Phosphorylase Kinase; domain 1 287 388 - -
Pral1439g00008 631 ProSiteProfiles Protein kinase domain profile. 312 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1439g00008 631 FunFam Wall-associated receptor kinase-like 20 389 597 - -
Pral1439g00008 631 Gene3D Transferase(Phosphotransferase) domain 1 389 599 - -
Pral1439g00008 631 MobiDBLite consensus disorder prediction 612 631 - -
Pral1439g00008 631 MobiDBLite consensus disorder prediction 589 611 - -
Pral1439g00008 631 MobiDBLite consensus disorder prediction 589 631 - -
Pral1439g00008 631 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 602 IPR044652 GO:0004672
Pral1439g00008 631 Pfam Protein tyrosine and serine/threonine kinase 315 583 IPR001245 GO:0004672|GO:0006468
Pral1439g00008 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Pral1439g00008 631 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1439g00008 Pral-Chr1439 67297 69794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1439g00008 26 593 Receptor kinase-like Gene Family AT1G25390 45.913 6.75e-151 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral1439g00008 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1439g00008 - - aprc:113871894 565.844