Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1439g00006 ATGGTTGTGCCTGTTTATTTGTTCGTCGTCGTCTTCTTGTTCCTGTCGGCTGACCATGTGCTTCTTCTATCGTTTGCTTCTGGAGATTGCCCACCTTTCTTTGAATGTGGGAGTCTGGGCAAGCTCTCGTTCCCTTTAACCACTCCACAAAGCAGAGATTGTGGAATTTTGCCCATTCATGGCTGTGAACACCCCAACGCTGAGAAAACCGTGCAATTAGGAGCAAAGCTGTTTCAAGTGACGGGGATAAGACATAGGTTCCATAATAAAGTTTACATTAGAGACGGAGATTTACAGAAGCGTTTGGTGAATGATAGTTGTGATGCCTTGTGCTGCAATATTACTCTTCCTCCAAGCTCGCCCTTGGGTTCCTTTCATATATTTCCAAATATAACCATGTACAAATGTAATAGTTTGCTCAATTACAGGCTTCCAAAGCAATTCTTGAACTATACAGGATGTGGTCAGAGTAAGAATGAGACCATCTTCTTCAGAACGCAAGATGAAGATGATACTCCATCTTCTTTAGCAGCATGTCCAAGGGTTCAGGTTCCAGTAAACATGCAGGCTTTCTCTGCTAATCCATTTACATTCATAGCTTCTGAATTCGGCGTCAGTATTCAGCTTTCTCCTGATTGTGGTCAATGTCGTTTTGAGAAAGGCTTATGCAGGCTCAACAGCACCGGAGGATTTTATTGTCTCAAATTTAAAGAAGATGAAAATAAAAGACAGGCTTGGAAGCAGGGATTGCTAATAGGTTTTGGAGTGGGATCAGGCATTCTGATATTAGCGTTGCTGCTCTGCTTCGGACTCTACAAACACAAACAGAATGCTATATCCCATGTCAGACTTCGATCAACGAATCAATACCCAAATGATGCAGACCCAGACCGTGGCAGACTCTTCTTTGGAGTCCCAATCTTCTCCTACACGGAGCTTCAAGGCGCAACCAACAACTTTGACCCCTCCAAGAAACTTGGAGATGGCGGCTTCGGCTCTGTTTACTATGGAAAGCTCCAAGATGGGCGTGAAGTTGCAGTGAAGCACCTATTCAACCACAACTACAAGCGAGTAGAACAATTTATGACAGAAGTTGAGATCCTCACTCTCCTGCGTCACCAAAATCTTGTCTGCCTCTATGGTTGCACTTCACGTCAGAGCCGTGAGCTTCTTCTTGTTTATGAATACATTCCAAATGGCACTCTTGCCAGTCACCTTCATCGCAGCTCTACAAATCCTGCATTGCTGACATGGCCTGTTCGAACCAAAATCGCCATAGAAACCGCCAGTGCTTTGGCTTACCTTCATGCTTCCGGCATTATCCACCGTGACGTCAAAACCAACAACATTCTTCTTGATAAGAACTTTTGTGTTAAGGTTGCAGATTTTGGACTTTCTAGGTTGTTCCCAGATGATGTCTCTCATGTCTCTACAGCTCCACAAGGAACACCAGGCTATCTTGACCCAGAATATCACTATTGCTTTAGACTGACTGATAAAAGTGATGTGTATAGTTTTGGGGTTGTGCTTATGGAGCTGATATCTTCAATGCCAGCAGTTGATATGGGAAGGAGCAAAGATGAGATTACATTGGCGGGTCTTACAGCTAGAAAGATTCAGAGGAATGAATTTGAGGAGTTGGTGGATCCATCTTTAGGGATTGAGAAAGATAGTGAGGTGAAAAAGAAGGTGTTTGCAGTAGGAGAATTGGCATTCCAGTGTTTGCAAATAGATAAAGAGATGAGGCCTTCCATTGATGAGGTTTTAGAGGTTTTGAGGAAAATCGAAGGTGGGAAAGTAGAAGAAGAAGAAGAAGAAGAAGACAAGGATACCGGGAAAGACGGAGATGGTGGTGAAGTTTTAAAGAATAAAGCAAATATAAAAGCACGAGCAGTGACTTCAATAAGCTTTGATCAGGCAAAGTGTTCAAGTCAGTATCTTCTCCAAACACATAATCCAGAAATGGGGAAATGGAAAAATTGA 1983 0.4297 MVVPVYLFVVVFLFLSADHVLLLSFASGDCPPFFECGSLGKLSFPLTTPQSRDCGILPIHGCEHPNAEKTVQLGAKLFQVTGIRHRFHNKVYIRDGDLQKRLVNDSCDALCCNITLPPSSPLGSFHIFPNITMYKCNSLLNYRLPKQFLNYTGCGQSKNETIFFRTQDEDDTPSSLAACPRVQVPVNMQAFSANPFTFIASEFGVSIQLSPDCGQCRFEKGLCRLNSTGGFYCLKFKEDENKRQAWKQGLLIGFGVGSGILILALLLCFGLYKHKQNAISHVRLRSTNQYPNDADPDRGRLFFGVPIFSYTELQGATNNFDPSKKLGDGGFGSVYYGKLQDGREVAVKHLFNHNYKRVEQFMTEVEILTLLRHQNLVCLYGCTSRQSRELLLVYEYIPNGTLASHLHRSSTNPALLTWPVRTKIAIETASALAYLHASGIIHRDVKTNNILLDKNFCVKVADFGLSRLFPDDVSHVSTAPQGTPGYLDPEYHYCFRLTDKSDVYSFGVVLMELISSMPAVDMGRSKDEITLAGLTARKIQRNEFEELVDPSLGIEKDSEVKKKVFAVGELAFQCLQIDKEMRPSIDEVLEVLRKIEGGKVEEEEEEEDKDTGKDGDGGEVLKNKANIKARAVTSISFDQAKCSSQYLLQTHNPEMGKWKN 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1439g00006 660 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 622 IPR044652 GO:0004672
Pral1439g00006 660 Gene3D Phosphorylase Kinase; domain 1 296 396 - -
Pral1439g00006 660 SMART serkin_6 320 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1439g00006 660 SUPERFAMILY Protein kinase-like (PK-like) 301 592 IPR011009 -
Pral1439g00006 660 MobiDBLite consensus disorder prediction 599 621 - -
Pral1439g00006 660 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Pral1439g00006 660 FunFam Wall-associated receptor kinase-like 20 397 605 - -
Pral1439g00006 660 Gene3D Transferase(Phosphotransferase) domain 1 397 610 - -
Pral1439g00006 660 CDD STKc_IRAK 326 595 - -
Pral1439g00006 660 ProSiteProfiles Protein kinase domain profile. 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1439g00006 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Pral1439g00006 660 Pfam Protein tyrosine and serine/threonine kinase 323 591 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1439g00006 Pral-Chr1439 46026 57440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1439g00006 34 596 Receptor kinase-like Gene Family AT1G25390 44.718 1.32e-150 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral1439g00006 PK_Tyr_Ser-Thr 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1439g00006 - - aprc:113871894 617.461