Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1439g00004 ATGCTGAAGTTTTCATTAGAGACGCAGATTTACAGAAGCGTCTGGCTTCCAAAGCAATTCTTGAACTATACAGGATGTGGTCAGAGTAAGAATGAGACCATCTTCTTCAGAACGCAAGATGAAGATGATACTCCATCTTCTTTAGCAGCATGTCCAAGGGTTCAGGTTCCAGTAAACATGCAGGCTTTCTCTGCTAATCCATTTACATTCATAGCTTCTGAATTCGGCGTCAGTATTCAGCTTTCTCCTGATTGTGGTCAATGTCGTTTTGAGAAAGGCTTATGCAGGCTCAACAGCACCGGAGGATTTTATTGTCTCAAATTTAAAGAAGATGAAAATAAAAGACAGGCTTGGAAGCAGGGATTGCTAATAGGTTTTGGAGTGGGATCAGGCATTCTGATATTAGCGTTGCTGCTCTGCTTCGGACTCTACAAACACAAACAGAATGCTATATCCCATGTCAGACTTCGATCAACGAATCAATACCCAAATGATGCAGACCCAGACCGTGGCAGACTCTTCTTTGGAGTCCCAATCTTCTCCTACACGGAGCTTCAAGGCGCAACCAACAACTTTGACCCCTCCAAGAAACTTGGAGATGGCGGCTTCGGCTCTGTTTACTATGGAAAGCTCCAAGATGGGCGTGAAGTTGCAGTGAAGCACCTATTCAACCACAACTACAAGCGAGTAGAACAATTTATGACAGAAGTTGAGATCCTCACTCTCCTGCGTCACCAAAATCTTGTCTGCCTCTATGGTTGCACTTCACGTCAGAGCCGTGAGCTTCTTCTTGTTTATGAATACATTCCAAATGGCACTCTTGCCAGTCACCTTCATCGCAGCTCTACAAATCCTGCATTGCTGACATGGCCTGTTCGAACCAAAATCGCCATAGAAACCGCCAGTGCTTTGGCTTACCTTCATGCTTCCGGCATTATCCACCGTGACGTCAAAACCAACAACATTCTTCTTGATAAGAACTTTTGTGTTAAGGTTGCAGATTTTGGACTTTCTAGGTTGTTCCCAGATGATGTCTCTCATGTCTCTACAGCTCCACAAGGAACACCAGGCTATCTTGACCCAGAATATCACTATTGCTTTAGACTGACTGATAAAAGTGATGTGTATAGTTTTGGGGTTGTGCTTATGGAGCTGATATCTTCAATGCCAGCAGTTGATATGGGAAGGAGCAAAGATGAGATTACATTGGCGGGTCTTACAGCTAGAAAGATTCAGAGGAATGAATTTGAGGAGTTGGTGGATCCATCTTTAGGGATTGAGAAAGATAGTGAGGTGAAAAAGAAGGTGTTTGCAGTAGGAGAATTGGCATTCCAGTGTTTGCAAATAGATAAAGAGATGAGGCCTTCCATTGATGAGGTTTTAGAGGTTTTGAGGAAAATCGAAGGTGGGAAAGTAGAAGAAGAAGAAGAAGAAGAAGACAAGGATACCGGGAAAGACGGAGATGGTGGTGAAGTTTTAAAGAATAAAGCAAATATAAAAGCACGAGCAGTGACTTCAATAAGCTTTGATCAGGCAAAGTGTTCAAGTCAGTATCTTCTCCAAACACATAATCCAGAAATGGGGAAATGGAAAAATTGA 1599 0.4284 MLKFSLETQIYRSVWLPKQFLNYTGCGQSKNETIFFRTQDEDDTPSSLAACPRVQVPVNMQAFSANPFTFIASEFGVSIQLSPDCGQCRFEKGLCRLNSTGGFYCLKFKEDENKRQAWKQGLLIGFGVGSGILILALLLCFGLYKHKQNAISHVRLRSTNQYPNDADPDRGRLFFGVPIFSYTELQGATNNFDPSKKLGDGGFGSVYYGKLQDGREVAVKHLFNHNYKRVEQFMTEVEILTLLRHQNLVCLYGCTSRQSRELLLVYEYIPNGTLASHLHRSSTNPALLTWPVRTKIAIETASALAYLHASGIIHRDVKTNNILLDKNFCVKVADFGLSRLFPDDVSHVSTAPQGTPGYLDPEYHYCFRLTDKSDVYSFGVVLMELISSMPAVDMGRSKDEITLAGLTARKIQRNEFEELVDPSLGIEKDSEVKKKVFAVGELAFQCLQIDKEMRPSIDEVLEVLRKIEGGKVEEEEEEEDKDTGKDGDGGEVLKNKANIKARAVTSISFDQAKCSSQYLLQTHNPEMGKWKN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1439g00004 532 Pfam Protein tyrosine and serine/threonine kinase 195 463 IPR001245 GO:0004672|GO:0006468
Pral1439g00004 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Pral1439g00004 532 MobiDBLite consensus disorder prediction 471 493 - -
Pral1439g00004 532 ProSitePatterns Protein kinases ATP-binding region signature. 198 220 IPR017441 GO:0005524
Pral1439g00004 532 SMART serkin_6 192 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1439g00004 532 SUPERFAMILY Protein kinase-like (PK-like) 173 464 IPR011009 -
Pral1439g00004 532 CDD STKc_IRAK 198 467 - -
Pral1439g00004 532 Gene3D Phosphorylase Kinase; domain 1 167 268 - -
Pral1439g00004 532 ProSiteProfiles Protein kinase domain profile. 192 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1439g00004 532 Gene3D Transferase(Phosphotransferase) domain 1 269 482 - -
Pral1439g00004 532 FunFam Wall-associated receptor kinase-like 20 269 477 - -
Pral1439g00004 532 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 26 494 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1439g00004 Pral-Chr1439 32925 57440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1439g00004 18 468 Receptor kinase-like Gene Family AT1G25390 49.231 3.96e-148 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral1439g00004 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1439g00004 - - aprc:113871894 519.235