Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1436g00001 ATGTCGATGGAGTCACCTGTCAATGGAGGCGAGTCTATATCAGAGGTTCAGAATTCGGTTTCTGCGCAAGATCACGACTCTCCTTCGACATCTGAAACGCCAAAATCTTCTTCTCGACCTCCCTTAAGAGCATCATCAAGAAATCAGGCGGCTCCTTCCACGACCTATCACACTGGTCATCCTAATTACGGAATTAAGATTCACCAAAAGCATCCTTACCAGGAAATCAACCATGTGCAGCATCAAGAACTGCCAAATACGGCCAAGCAACATCACAATTCTAGTGGAAAATCAGGAGAAATTAGTTCAGGGAAGAATATATCTACGATAGAAACAAAGAATCATGATGCAAAAGGCATATCAGCCTCATCTAAAGGAGTTGGTGATCAAACGAAGAGTTGCTCTCGGTCAGATGTAACTTTTTGTGCAAGTCCTCAGAATAGCTTCTATTCTGCAGCTACCTATTCAGAAGCCAAACAAAGTTTCGTCAATACTGAAGTGAGTGAGTGTGTTAGTGTGGATAAGTCAGGTGAAAGTGGTGAAGCCACTAACTCTTGTGACTTCAATGAGAGCAGGAAGACCAGTATATGTAGAGGGAGTACTGGGAGCGATGTGAGTGATGAGAGTAGCACCAGTAGTTTGAGCAGTGCGTTGTATAAACCTCACAAGGCTAATGATATAAGATGGGAAGCGATTCAAGCCGTGCGAGCTCGCGATGGGGTGCTGGAAATGAGGCATTTCAGATTGTTGAAGCAATTGGGATGTGGAGACATAGGAAGTGTGCATCTTGCAGAGTTAAGCGGCACAAGGACATGTTTTGCAATGAAGATAATGAACAAAACGGAGCTGGCTAGTAGGAAGAAGCTTCTGAGGGCTCAGACAGAAAGAGAGATCTTGCAGTCTCTGGATCACCCTTTTTTGCCCACATTATATACACATTTTGAGACAGAGACGTTCTCTTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCGCTGAGGCAAAGACAGCCTAGGAAGTATTTCTCGGAGCATGCTGCCAGGTTTTATGTAGCAGAAGTTCTTCTTGCTTTGGAATACCTTCACATGCTTGGGATCATCTACAGAGACCTCAAACCAGAGAACGTGTTGGTGCGTGAAGACGGTCACATAATGCTCTCTGACTTCGACCTCTCTCTGCGTTGCGCCGTGAGTCCGACTCTCGTAAAATCGTCAAACTCAACCCTGGACGGAAGAACTTCGGGATACTGCATTCAGCCGACCTGCATCGAACCGACCTGCGTGATGCAGCCAGATTGCATCCAGCCCTCCTGTTTCACTCCTCGATTTCTATCCGGCAAATCCAAGAAAGACAAAAAGCCCAAGCCAAAGAACGAAACGCCACACCAGGTGACTCCTCTCCCGGAGCTCATCGCCGAACCCACAAACGCCCGTTCCATGTCCTTCGTGGGTACACACGAATACTTAGCACCCGAAATCATCAAAGGCGAAGGCCACGGAAGTGCAGTAGACTGGTGGACGTTCGGGATATTCTTGTACGAGCTTTTGTTCGGAAGAACGCCGTTCAAGGGGTCGGCTAACAGAGCGACTCTGTTCAACGTGGTGGGGCAGCCACTGAGGTTTCCAGAATCACCCACCGTTAGCTTCGCTGCTAGGGATTTGATCAGAGGATTGCTCGTGAAAGAGCCTCAACATCGTCTGGCTTATAGACGAGGAGCCACGGAGATCAAACAGCACCCGTTCTTTCAGAACGTGAATTGGGCACTGATACGGTGTGCAAACCCGCCGGAGGTTCCAAGGATAGTGGCCCTGAAAGAGATGGCGGCTCAGAAAGTGCCCGGCGTTAAGCCTGCCGGTAACTATTTAGATATTGATTTCTTTTGA 1890 0.4794 MSMESPVNGGESISEVQNSVSAQDHDSPSTSETPKSSSRPPLRASSRNQAAPSTTYHTGHPNYGIKIHQKHPYQEINHVQHQELPNTAKQHHNSSGKSGEISSGKNISTIETKNHDAKGISASSKGVGDQTKSCSRSDVTFCASPQNSFYSAATYSEAKQSFVNTEVSECVSVDKSGESGEATNSCDFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAVRARDGVLEMRHFRLLKQLGCGDIGSVHLAELSGTRTCFAMKIMNKTELASRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPRKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSTLDGRTSGYCIQPTCIEPTCVMQPDCIQPSCFTPRFLSGKSKKDKKPKPKNETPHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRIVALKEMAAQKVPGVKPAGNYLDIDFF 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1436g00001 629 MobiDBLite consensus disorder prediction 193 212 - -
Pral1436g00001 629 PANTHER FLIPPASE KINASE 1-RELATED 82 606 - -
Pral1436g00001 629 Gene3D Phosphorylase Kinase; domain 1 246 330 - -
Pral1436g00001 629 MobiDBLite consensus disorder prediction 114 133 - -
Pral1436g00001 629 SUPERFAMILY Protein kinase-like (PK-like) 225 602 IPR011009 -
Pral1436g00001 629 MobiDBLite consensus disorder prediction 447 466 - -
Pral1436g00001 629 ProSiteProfiles Protein kinase domain profile. 247 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1436g00001 629 MobiDBLite consensus disorder prediction 86 107 - -
Pral1436g00001 629 FunFam serine/threonine-protein kinase D6PK-like 479 602 - -
Pral1436g00001 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 368 380 IPR008271 GO:0004672|GO:0006468
Pral1436g00001 629 Gene3D Transferase(Phosphotransferase) domain 1 478 602 - -
Pral1436g00001 629 Gene3D Transferase(Phosphotransferase) domain 1 331 429 - -
Pral1436g00001 629 Pfam Protein kinase domain 481 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1436g00001 629 Pfam Protein kinase domain 248 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1436g00001 629 FunFam serine/threonine-protein kinase D6PK-like 331 398 - -
Pral1436g00001 629 CDD STKc_phototropin_like 245 602 - -
Pral1436g00001 629 SMART serkin_6 247 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1436g00001 629 MobiDBLite consensus disorder prediction 1 65 - -
Pral1436g00001 629 FunFam Serine/threonine-protein kinase D6PK-like 245 330 - -
Pral1436g00001 629 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1436g00001 Pral-Chr1436 3789 7806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1436g00001 155 629 AGC Kinase Gene Family AT5G47750 71.545 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral1436g00001 Pkinase 6.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1436g00001 K08286 - gmx:100802402 954.51