Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1434g00002 ATGGCCAGGGTCGGATTACCACCGGGTTTTCGGTTCCATCCGACCGACGAAGAGCTTGTCAATTATTATCTCAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGACATCATTCCTGAGATTGATCTCTACAAATGTGAGCCTTGGGAACTTGCAGACAAGTCATTTCTGCCAAGTAGAGATCCAGAGTGGTACTTCTTTGGACCCAGAGACAGGAAATACCCTAATGGTTTCAGAACTAACAGAGCCACTAGAGCTGGGTACTGGAAGTCCACTGGCAAAGACAGAAGGGTCACTTCCCAAAACAGACCCATTGGCATGAAGAAAACTCTTGTTTACTACAGAGGCAGAGCCCCTCAAGGCATCAGAACTGACTGGGTCATGCATGAGTATCGCCTCGATGATAAAGAATCCGAGGACACCTCCGGAATTCAGGATACTTATGCATTGTGCCGTGTGTTCAAGAAAAATGGAATCTGCTCTGAAATTGAAGAGCAAGGGCAAAGTAGTTTAACACTAATTGAGAGCTCACAAACCATAAACATTAATAATGAAAGTGAAACCATGTCTCCAGATCCAGCTGGGGCATCTTCATGCTTGGAGGAGGAAGACAAAGATGATTCATGGATGCAGTTCATTACAGATGATGCATGGTATCCTTCTAATGCAGCCATGGCAGGCTGTGAAGAAGTTTCTCACTTTACATTCACAAACTGA 717 0.4449 MARVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEIDLYKCEPWELADKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTSQNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKESEDTSGIQDTYALCRVFKKNGICSEIEEQGQSSLTLIESSQTININNESETMSPDPAGASSCLEEEDKDDSWMQFITDDAWYPSNAAMAGCEEVSHFTFTN 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1434g00002 238 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Pral1434g00002 238 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 186 - -
Pral1434g00002 238 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Pral1434g00002 238 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Pral1434g00002 238 FunFam Nac domain-containing protein 86 15 159 - -
Pral1434g00002 238 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1434g00002 Pral-Chr1434 26205 29822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1434g00002 1 227 NAC Transcription Factor Family AT3G17730 77.083 1.11e-130 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1434g00002 NAM 9.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1434g00002 - - gmx:100784495 439.113