Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1425g00001 ATGGCAACCACTGTTGCTGCCACTCCTATTGGGACTTCGACGCCCGTTTCTTTCCGCAACAATATTCCGAGAATCAGAGTTAGTGTGGCTAACATTCGAAGCACCGAAATTTCCCTCCCGCATCACTCAGAAATGGCTCCTCCTTCGTGTTGGCGTGTTTACCTTATCCCCCTCCTGCTTCTCAATCACCAACCCCATCTTCCAATACCAAATTCACTTCTTCTCCTTCAAACTAAGCTCTACGTCACTGGAATATCTTTTCGTACCACTGAAGAGAGCTTGCGAAATGCCTTTAAGAAATTTGGTGAACTTGTGGAAGTCAACCTGGTGATGGATAAAATAGCAAATAGACCAAGAGGATTTGCCTTTCTTCGTTATGCAACTGAAGAGGATTCTCAGAAGGCTATTGAAGGAATGCATGGGAAGTTCTTGGATGGCAGGGTCATATTTGTGGAAGTTGCAAAACCAAGATCAGAATTGCGCCGAAGACTTGACCAAAACCCTAGATAG 510 0.449 MATTVAATPIGTSTPVSFRNNIPRIRVSVANIRSTEISLPHHSEMAPPSCWRVYLIPLLLLNHQPHLPIPNSLLLLQTKLYVTGISFRTTEESLRNAFKKFGELVEVNLVMDKIANRPRGFAFLRYATEEDSQKAIEGMHGKFLDGRVIFVEVAKPRSELRRRLDQNPR 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1425g00001 169 Gene3D - 72 169 IPR012677 -
Pral1425g00001 169 SMART rrm1_1 79 152 IPR000504 GO:0003723
Pral1425g00001 169 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 78 156 IPR000504 GO:0003723
Pral1425g00001 169 SMART rrm2_1 79 152 IPR003954 GO:0003676
Pral1425g00001 169 PANTHER NUCLEOLAR PROTEIN 8 77 162 - -
Pral1425g00001 169 SUPERFAMILY RNA-binding domain, RBD 62 166 IPR035979 GO:0003676
Pral1425g00001 169 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 80 149 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1425g00001 Pral-Chr1425 1810 5069 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1425g00001 78 167 Eukaryotic Initiation Factors Gene Family AT4G34110 30.851 6.55e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1425g00001 - - msin:131236961 166.777