Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1422g00012 ATGTCGAAATCATTATATCTAACTCATGTATCGTTCCTCTTATCTAATTCTAGAGTCATGGCCTCTGGCAGAGTTTTCTATCATGCGCTTCCATCTACAAAATTCACATCATTCAACAAAGCGGACACTATCTCTCTATCACGCTCCCTACGAACCTTCTCCACCACTCGAACCCCTTACCCACTTCAGTACGAGATGATTATCAGCCGTCCAGTCAATTCTGTGCATGCCCATTCTCGCCGTCGAGCTGTTCGACAAAATGACCCCAATGCAGAGGGCTTCCCTGACTCGGAGTCTCCGGAAGAGTCCGTTTCTCCCGCAGAGTCCGTCTCTGAATTGGGATTAGATAGCTGGGTTGATCGGAAATTGGCTTCTGAGGAAGAAGCTAACCAACCCGGTTCCCAAAAATCGGAGCTTGACAAGGCTAAGAAAAAATATTACAGAAAACGGAGGAAGAGGATGTATGGGTCGGACTCTGATGAAGCAAATAGACGACCTGAAGAGAAGTTCGTGGAACTGAAGCCTGAGGTGGTAGAGCTTCCTACATTGCACAAGAAGGAGGAGGAATTGTATTTCTACGATACGTTTTCTTACCCGTGGGAGAAGGAGAAGCACTATAAGATGGTCTATCAGTTGGAGAAGAAATATTTTCCTGATCAGTGTCTTGATAAGGCGTTCCTAGAACCGGGAGAAGCAAATGCAAACGTGAATGTAAATATCGATGCAAAGACTAAGAGCAAGGTGAGGGAAAAGAAGAAAGTCAGGAAAGATAGAAGGGAGAAAAAAGATGAGGTTGGTGATGAAAGAAATGATTCCAAGTTGATATTCTTCGGGGAGAAAAAAGAAGAAGAGGATAATAGAGGACAGGTTAAGGAAACAAGAGAAGATCTAACCGAAAAGAAAGTCGAAGAGTTCTTTAAATATTTGAAGAAAATTCCGAATAAGGATGTTGAAGTGGGTAATGCTGAGCCGTTTCTTGCGTCAAGGAATTCTGGTCTTCCTCCTAGATGGGATGGTCCTCATGGAACCGTTATTTTGGTGAATAAACCCAAAGGTTGGACTTCATTTACAGTTTGCGGAAAGCTGCGTCGCTTAGTCAAAGTGAAAAAGGTAGGTCATGCTGGAACTCTTGATCCAATGGCTACGGGTTTATTGATTGTTTGTGTTGGTAAAGCAACAAAATTGGTGGAGAGCTATCAAGGCATGATTAAGGGCTATAGTGGAGTTTTCCGACTAGGGGAGGCTACGTCAACATGGGATGCTGATTCACCGGTCATTCAGCGTGAGCCATGGGAGCACATCAAAGATGAGGAAATAAAGAGAACTGTAGCATCCTTTTGTGGGGAGATTTGGCAAGTTCCCCCAATGTTCTCTGCCATTAAGGTTGGAGGCAAAATTTGA 1401 0.439 MSKSLYLTHVSFLLSNSRVMASGRVFYHALPSTKFTSFNKADTISLSRSLRTFSTTRTPYPLQYEMIISRPVNSVHAHSRRRAVRQNDPNAEGFPDSESPEESVSPAESVSELGLDSWVDRKLASEEEANQPGSQKSELDKAKKKYYRKRRKRMYGSDSDEANRRPEEKFVELKPEVVELPTLHKKEEELYFYDTFSYPWEKEKHYKMVYQLEKKYFPDQCLDKAFLEPGEANANVNVNIDAKTKSKVREKKKVRKDRREKKDEVGDERNDSKLIFFGEKKEEEDNRGQVKETREDLTEKKVEEFFKYLKKIPNKDVEVGNAEPFLASRNSGLPPRWDGPHGTVILVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVESYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEEIKRTVASFCGEIWQVPPMFSAIKVGGKI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1422g00012 466 Coils Coil 280 300 - -
Pral1422g00012 466 MobiDBLite consensus disorder prediction 125 142 - -
Pral1422g00012 466 MobiDBLite consensus disorder prediction 78 112 - -
Pral1422g00012 466 Gene3D Pseudouridine synthase 339 466 - -
Pral1422g00012 466 MobiDBLite consensus disorder prediction 153 167 - -
Pral1422g00012 466 MobiDBLite consensus disorder prediction 245 266 - -
Pral1422g00012 466 Pfam TruB family pseudouridylate synthase (N terminal domain) 363 465 IPR002501 GO:0006396
Pral1422g00012 466 PANTHER TRNA-PSEUDOURIDINE SYNTHASE 215 465 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pral1422g00012 466 MobiDBLite consensus disorder prediction 125 167 - -
Pral1422g00012 466 SUPERFAMILY Pseudouridine synthase 343 465 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1422g00012 Pral-Chr1422 47729 51484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1422g00012 309 461 NAC Transcription Factor Family AT3G57150 33.987 6.77e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1422g00012 K03177 - qsa:O6P43_004707 623.239