Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1420g00003 ATGAGGAAAATTAGGGGATTTAAGCTTGGACGACGCCTTATCCGAATCTCCAGATGGATCTTCCGGAGAGCTCGACCCGGAGGATATCGGAGGTTGGGTTCCCATGATTCGCCGGCGACGAAGACCGTAGCAAGCATTCTCAAATGGGGACGCAAGCTTACCAGAGGAGCCAGATCCCTCTGCTGCGCGAAGCCCAGGTTGGGATATATTCCGGTGGGATCCGACCCGGTACAGGACAAGCCTCCTGCAGTACCGAAGGGTTACTTGGCGGTGTACGTTGGGCAGAAGGACGGCGAGTTTCACCGGGTGCTGCTGCCGGTGATCTACTTCAACCACCCTTTGTTTGGAGAGTTGCTTAGGGAGGCGGAGGAGGAGTTCGGGTACAACCATCCCGGGGGGATAACGATTCCGTGTCCGTTCACCGAGTTTGAACGGGTGAAGACCCGAATAGCATCCGGGTCAGCCAGGACTGGCCGGAGATTGGCGTGGAGTGGGCTCCATTGA 504 0.5714 MRKIRGFKLGRRLIRISRWIFRRARPGGYRRLGSHDSPATKTVASILKWGRKLTRGARSLCCAKPRLGYIPVGSDPVQDKPPAVPKGYLAVYVGQKDGEFHRVLLPVIYFNHPLFGELLREAEEEFGYNHPGGITIPCPFTEFERVKTRIASGSARTGRRLAWSGLH 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1420g00003 167 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 61 145 IPR003676 GO:0009733
Pral1420g00003 167 Pfam Auxin responsive protein 64 147 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1420g00003 Pral-Chr1420 59470 60706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1420g00003 81 143 Calmodulin-binding Proteins AT3G43120 52.381 5.48e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1420g00003 K14488 - cit:102615286 232.261