Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1418g00004 ATGGCGTGCAGTGATAATGAAGCACACAAAATTGAAAAAATAGTGGAAAGTGTCAACAAAAGGTTGCGCAAACAGTATCCCGAAGATAATGGAGAAGACTTGATTGGAATTGAAGAGAAAATGCAACACGTAGAATTATTGTTGGACAAGGAGTCCAACGATGTCCGAATTATTTGCATTTGGGGGATGGGCGGTCTGGGCAAAACAACCCTTGCAATAGCATTATTTAAGAAGCGGCGTTATAAATACGAAGGGTCTGTCTTTATGGAAAAAGTGGGAGAAAAATCAAAGAATCGCGGAATAGAGGATGTGAAGAAAGATCTTATTTCGGAATTATTTGGGGATAAAAATGCTCACACTAGCCCTTACGACAAGAGGAGACTTCAACGGAAAGAAGTTTTCATTGTTTTGGATGATGTTGATAGTTATGATCAAGTAAACGATTTGGTTGGAAGGCGCGATTTGTTTAGACCAGGTAGTAAAATCTTAGTAACAACTAGAAATAAAAAAATCCTTGGTGCTAAGGTAGATGTAGATCGTGATGCTATATATGAACTGAAGGGTTTGGATTTTGAGGAGGCTTTTCAACTTTTCTCTTTACACGCCTTTGGAAAAGACCGCCCTGCCCCTGACCAAAAACTAAGAGAGTTGGCACAGAAATTGACTAGGTATGCAAATGGAAATCCACTGGCCCTGAAAGTTTTAGGTTCCTCCTTGGCTAATGAGAAAAATCAAGAAGTCTGGGAAAGCCGATTAGAAAAACTTCAAAAATTACCAGATCCACAAATTAACGAAGTCCTAAAAGTAAGTTTTGAAGGACTTGAGGCTGGAGAGAAAGAGAGTTTCTTGGATATCGCATGTCTTTTAACCGAATATAATGATTTTATGGGATTTCTTTCAACTGATGATGTTGAGGCGGTAAAAGATTTGTTAAAAGCCCGACGTGGTTATGCAGTCCATTTTGAATTGGAAAGACTTAAAGAGACGGCTCTTTTACAAGTTGATGAATCTGGGAGCATATCGATGCACGATCTGCTAAGAGAAATGGGTCGACAGGCTGTTCGTGATGAGTCACCAAAGCATCCTAGAAAGCGCAGTCGATTATGGGATCCTAAAGAAATATCTGAAATATTGGGGGCAAAAAAGAGAAGTAAAGCCATTGAAGGTGTAAGCCTGAACCTTCGAGAAGTTGGAGAGAAGCGCTTAAGTGCTGGGGCCTTTCGTTCAATGCCCAAACTAAAGATTCTTAATATTTATTCTTATGAAGAAATCGATGGTGGGGATGAAGTGGATGTAGAAATTCCTGACGGATTAGACTTTTTGCCAGAAGGACTCATAAAATTGCGTTGGATAGCATACCCTTGTGAGTCCTTGCCAGCAACATTCAAGGCTGAAAGTCTTGTTCAATTGGAAATGCCCTTCAGCAGTCTGACAAGACTTTAG 1443 0.3992 MACSDNEAHKIEKIVESVNKRLRKQYPEDNGEDLIGIEEKMQHVELLLDKESNDVRIICIWGMGGLGKTTLAIALFKKRRYKYEGSVFMEKVGEKSKNRGIEDVKKDLISELFGDKNAHTSPYDKRRLQRKEVFIVLDDVDSYDQVNDLVGRRDLFRPGSKILVTTRNKKILGAKVDVDRDAIYELKGLDFEEAFQLFSLHAFGKDRPAPDQKLRELAQKLTRYANGNPLALKVLGSSLANEKNQEVWESRLEKLQKLPDPQINEVLKVSFEGLEAGEKESFLDIACLLTEYNDFMGFLSTDDVEAVKDLLKARRGYAVHFELERLKETALLQVDESGSISMHDLLREMGRQAVRDESPKHPRKRSRLWDPKEISEILGAKKRSKAIEGVSLNLREVGEKRLSAGAFRSMPKLKILNIYSYEEIDGGDEVDVEIPDGLDFLPEGLIKLRWIAYPCESLPATFKAESLVQLEMPFSSLTRL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1418g00004 480 Gene3D - 189 275 IPR042197 -
Pral1418g00004 480 PRINTS Disease resistance protein signature 225 239 - -
Pral1418g00004 480 PRINTS Disease resistance protein signature 57 72 - -
Pral1418g00004 480 PRINTS Disease resistance protein signature 127 141 - -
Pral1418g00004 480 PRINTS Disease resistance protein signature 408 424 - -
Pral1418g00004 480 Gene3D - 17 179 IPR027417 -
Pral1418g00004 480 SUPERFAMILY "Winged helix" DNA-binding domain 262 378 IPR036390 -
Pral1418g00004 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 285 IPR027417 -
Pral1418g00004 480 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 480 IPR044974 GO:0006952
Pral1418g00004 480 Pfam NB-ARC domain 40 257 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1418g00004 Pral-Chr1418 35343 36873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1418g00004 35 480 WRKY Transcription Factor Family AT5G45050 32.265 9.69e-59 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1418g00004 - - pcin:129290874 346.28