Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1418g00002 ATGGATTCAAGAGACTTGATTGAACTCCCAGATTTTTCCAAGGCCACACGTCTTGAAGATGTTAGTCTCATGCGGTGTATAAAATTACGGAGTGTTCATCCATCTATTTTATCTCTCCCCAGCCTGCATAGTTTATGGCTACACCGTTGCAAGTCCCTTACCAGCCTTACAAGCGATACCCCTCTCCAATCTCTCAGTTGGCTCGATGTAAGTTTTTGCTCAAGTCTGGAGGAATTTTCAGTAACCTCAGAAAATGAAGAGCTCTGTTCACACCTTTCAGGAGCTGCCATCAGAGGTGCGTTGCGCTCATCAAGTGGGCATCGCAGCAAAATTCGTGACTTAGCTATAGCCAATTGCGGAAATGTGACAAGCGTTCACGAATTGATTGAGCTGCGTGACCTTCGAGGTGTTGATGCTGGAGGCTGTAATGAGCTAGCGTCACCTCTCCTGTCCAAGTGTGATAAGATGGGTGCTTTGGAAAGACTAGGGCTTCCGTATTGCAATGAATTATCTGAACTTCCTAATGACATCAGGTTGCTGTCATCATTACGTCACTTAGATCTCTCAGAGACTAATGTACAGACCTTGCCTTCGAGCATCAAACATCTTTCACGCCTGCAACGTCTTAACCTGGACGGATGTAAAAGGCTTCGTTGTCTACCAGAGCTCCCTCCCTCTGTCTTGCAATTGTTTGCAACTGACTGCATATCCCTTGAGACCATACAATATTCACCTTTGACAAACGAAGGTGAAGAAGGGAAAGAGAAGGCATATGCACGCTTTATATTCACAAATTGCAAGAAGCTGAATCGACGGGCAATCGAAGCTGCTGAGGCAAGAGTGCTACTTGCGATAAAGAAACCCACTTATGACGATGCTATATTGGAATATCCAGGAAAAATAGTTCCAAAGTGGTTCAAGTTTAAGAGTACTGAAGAGGATCCCATGACTGTGAATCTCAGTTCGATTCCAAATTCTGAGGATGGGGGATTCCTTTTTTGCGTCGTCTTTTCTAAATTACCATTAGATGGGGGAGGAGAAATTGATGCCAAATGGCTTATTGATGGTAAATATGCTTGCAGGGCCGCTAAAAGCCCGTTTTACTTGTATGGGGAGTCCTCAAAGCATGTTGGTCTTTGGTATGATCCTGATTCACTTGGAGAACTAAAAAGGAAAATTGAAGAAAGGAAAAGAAATGGTCAGAGCAACATGGAGCTTAAAGTTAAATTCGAAGCTCGTTGGTATGATGACAGAACGGCAGAGATCAAAAGGTGTGGAGTATGCCCAGCATCTGCAGTTGAATATCAAGATGGTGACATTAAACAAATTCAATTGCCATTGCCTCCTCAGCCTAGCTCTAATGCAATGGAAGCGGCCTCTCTCTCTCGAAAGCGCAAATGCACTATAACTTCATACGGATCAAAAGGTGACATTCGTTCGGATGATGACAGAATGGTAAAGATCAGAAGCCTGGCTCTAATGCAATGGAAGCGGCCTCTCTCGAAAGCGCAAATACCACAGCTTGCTTCGATGAATTTGAAGAAATGA 1548 0.4399 MDSRDLIELPDFSKATRLEDVSLMRCIKLRSVHPSILSLPSLHSLWLHRCKSLTSLTSDTPLQSLSWLDVSFCSSLEEFSVTSENEELCSHLSGAAIRGALRSSSGHRSKIRDLAIANCGNVTSVHELIELRDLRGVDAGGCNELASPLLSKCDKMGALERLGLPYCNELSELPNDIRLLSSLRHLDLSETNVQTLPSSIKHLSRLQRLNLDGCKRLRCLPELPPSVLQLFATDCISLETIQYSPLTNEGEEGKEKAYARFIFTNCKKLNRRAIEAAEARVLLAIKKPTYDDAILEYPGKIVPKWFKFKSTEEDPMTVNLSSIPNSEDGGFLFCVVFSKLPLDGGGEIDAKWLIDGKYACRAAKSPFYLYGESSKHVGLWYDPDSLGELKRKIEERKRNGQSNMELKVKFEARWYDDRTAEIKRCGVCPASAVEYQDGDIKQIQLPLPPQPSSNAMEAASLSRKRKCTITSYGSKGDIRSDDDRMVKIRSLALMQWKRPLSKAQIPQLASMNLKK 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1418g00002 515 Pfam Leucine rich repeat 159 215 IPR001611 GO:0005515
Pral1418g00002 515 Pfam C-JID domain 298 428 IPR045344 -
Pral1418g00002 515 SUPERFAMILY L domain-like 6 241 - -
Pral1418g00002 515 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 158 222 - -
Pral1418g00002 515 Gene3D Ribonuclease Inhibitor 2 89 IPR032675 -
Pral1418g00002 515 Gene3D Ribonuclease Inhibitor 90 270 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1418g00002 Pral-Chr1418 24397 26023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1418g00002 37 234 WRKY Transcription Factor Family AT4G12020 25.664 1.84e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1418g00002 - - pcin:129291693 306.605