Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1415g00009 ATGGAAGAGCAATCGCTATTTTCCTCCTCTTCTCCCACCTATGGATGGACTTATGATGTGTTTCTTAATTTTAGAGGTGAAGATACTCGCTTTGATTTTACCATAAATCTCTACAAAGCTCTGCATCAAAAGGGCATTCATACTTTTATAGACAACAAGGGGCTTAGAAGAGGAGAAGGAATTACTCCATCTCTTCTTAAAGCAATCCAAGAGTCTACAATAGCTGTCACAATTTTCTCCAAGAATTATGCTTCTTCGACATTTTGTTTAGATGAGCTTGTTCACATCCTTGAGTGTAGACAGAAAAAAGGTCAGCTGGTTTTGCCAATTTTCTATGATGTTGAACCATCGGATGTGCGACATCAAAGAGGAAACTACAAAGAAGCATTTACTCAACATGAGCAGAGGTTCAACAATGATCAGAAGAAGGCGCAAAAATGGAAGCAGGCTCTGCGAGATGCTGCTGATATTGCTGGTTTTTATTTCAAACCTGGGAAAGAACATGAATGTGATTTAATTGAAAGGATTGTAAAAGAGGTCTGTAGGAGGATTAACTGCAAGCCTTTACACATTGCTGATTATCCAGTTGGACTTGAGTGTCGGGTGCGCAAAGTAATATCTCTTCTAGATGTTGAATCTAATGAAGGGGTCCTAATGGTAGGGATTTGTGGAATGGGTGGAATAGGCAAAACAACAATTGCTAGAGCAGTATCCAATTTAATTACTGATATGTTTGAAGCCTTTTGCTTTGTTGCTAATGTCAGCAAAAATTCACAAAAGCACGGCCTAGCATACCTCCAAAAAATGCTTCTTTCTAAACTGGTTGGGGAAGATTTCAACTTCGTTGACATCAATCAAGGAATTCCAATAATGAAACAGAGGCTTCACAGAAAGAAAATTCTTCTCGTTCTTGATGATGTTCATGAGCCAAGGCAATTGCAAGCCATGGCTGGGGCACTTGATTGGTTTGGTTCTGGAAGTAGAATCATTGCAACAACAAGGGATAAACATTTACTAGCAAGACATGGTGTTGAAAGAATCTACGAAGTAGAGAGTTTAAATGAAAATGAAGCTCTTGAACTACTTAAATGGAGTGCCTTTCGAGAAAATAAAGTTGATCCAAGTTTTATGGACATGTTAAACAATGTAGTACTCTATGCTGGTGGACTTCCATTGGCTTTGGAAGTTATAGGTTCCAACTTGTTCAATAGAGGAATCAATGATTGGAATTCTGCATTAGATAATTATCGAAGAATTCCCAACAGAGAGATCCAACAGGTACTCAAAATGAGTTATGATGCCTTGGACGAATTTGAGAAGGAAATTTTTCTTGATATTGCTTGTTGCTTTAAAGGTGACAGCTTGGAATATGTCACAAGTGCTCTGTATGCTCGTGGCATATGCCCAGATTATGGTGTTAAGGTGTTGATTGATAAATGCCTCATAAAGATTGACAATGGCCTTGTGACAATGCATGATTTGATTCAAGATATGGGTAAAGAAATTATTCGGCAACAATCACCAACTGAACTAGGCAAACGCTCTAGATTGTGGTTTCATGAAGACATTCTCCAAGTTTTAGAGGGAAACAAGGGAACTGGGGAGATTGAAGCCATAAATCTGCACATGCCTGGAGAAAAGGAGATCAATTGGAGTGGATTGGCCTTCAAAAAGATGCAAAATCTTAAGATGCTTATTGTTAGAAATGCAAGATTTTCCACAGGTCCCAAGCATCTCCCTAACAGTTTGAGATTGCTAGACTGGAAGGGATATACTTATCCCTCCTTTCCATTTGATTTTTGTCCCAAGGAACTAGTTATCCTCAGGATGCCTGAAAGTTCCCTTAAACTGAATTCACCACCCAAGGCATGGGTTCCCGTCCGTGAGTGTAATGGATTTTAG 1902 0.3906 MEEQSLFSSSSPTYGWTYDVFLNFRGEDTRFDFTINLYKALHQKGIHTFIDNKGLRRGEGITPSLLKAIQESTIAVTIFSKNYASSTFCLDELVHILECRQKKGQLVLPIFYDVEPSDVRHQRGNYKEAFTQHEQRFNNDQKKAQKWKQALRDAADIAGFYFKPGKEHECDLIERIVKEVCRRINCKPLHIADYPVGLECRVRKVISLLDVESNEGVLMVGICGMGGIGKTTIARAVSNLITDMFEAFCFVANVSKNSQKHGLAYLQKMLLSKLVGEDFNFVDINQGIPIMKQRLHRKKILLVLDDVHEPRQLQAMAGALDWFGSGSRIIATTRDKHLLARHGVERIYEVESLNENEALELLKWSAFRENKVDPSFMDMLNNVVLYAGGLPLALEVIGSNLFNRGINDWNSALDNYRRIPNREIQQVLKMSYDALDEFEKEIFLDIACCFKGDSLEYVTSALYARGICPDYGVKVLIDKCLIKIDNGLVTMHDLIQDMGKEIIRQQSPTELGKRSRLWFHEDILQVLEGNKGTGEIEAINLHMPGEKEINWSGLAFKKMQNLKMLIVRNARFSTGPKHLPNSLRLLDWKGYTYPSFPFDFCPKELVILRMPESSLKLNSPPKAWVPVRECNGF 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1415g00009 633 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 186 - -
Pral1415g00009 633 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 616 IPR044974 GO:0006952
Pral1415g00009 633 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 160 IPR035897 -
Pral1415g00009 633 Pfam NB-ARC domain 201 435 IPR002182 GO:0043531
Pral1415g00009 633 Gene3D - 186 346 IPR027417 -
Pral1415g00009 633 SUPERFAMILY "Winged helix" DNA-binding domain 423 528 IPR036390 -
Pral1415g00009 633 PRINTS Disease resistance protein signature 219 234 - -
Pral1415g00009 633 PRINTS Disease resistance protein signature 294 308 - -
Pral1415g00009 633 PRINTS Disease resistance protein signature 557 573 - -
Pral1415g00009 633 PRINTS Disease resistance protein signature 387 401 - -
Pral1415g00009 633 Gene3D - 14 185 IPR035897 -
Pral1415g00009 633 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Pral1415g00009 633 Pfam TIR domain 18 180 IPR000157 GO:0007165
Pral1415g00009 633 Gene3D - 352 436 IPR042197 -
Pral1415g00009 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 446 IPR027417 -
Pral1415g00009 633 SMART AAA_5 216 353 IPR003593 GO:0016887
Pral1415g00009 633 SMART till_3 17 157 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1415g00009 Pral-Chr1415 73533 76599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1415g00009 7 616 WRKY Transcription Factor Family AT4G12020 29.469 1.65e-64 229