Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1415g00008 ATGACTGGGGAATCACCATTTTCCCCTTCCTTCCCGCATGGATGGACATATGATATTTTTCTCAATTTTAGAGGTGAAGATTCTCGCTTTGATTTTGCTAGAAACCTCTACGAGGCTTTACAACAAAAAGGCATTCATACTTTTTTAGACAATGAAAGGCTTAGAAAAGGAGAAAAAATTGCACCGTCACTTCTCAAAGCAATCCAAGAGTCTAGAATGGCTATCACTATTTTCTCTAGAAACTATGCTTCCTCTACATTTTGTTTAGATGAGCTTGTTCAAATCATTGAGTATATAAATAAAAAAGGTAGATTGGTTTTGCCCATTTTTTATGACGTGGATCCATCAGAAGTACGGCATCAAAGAAAAAATTATCGAGAAGTATTTGCTCAGCATGAGAGGTGGCTTAGAAATGACAAGGAGAAGGTGCAAAAATGGAGGCGGGCTCTACAGGATGTTGCTAATCTCTCGGGTTTCCATTTCAAACCTGGGGATCAATATGAATATGCTTTTATCAAAGAGATTGTTAAAGAGGTCACCAGGAAAATGAACCGAAAGCCTTTGCATATTGCTGATTATCCAGTTGGACTTGAGTATCGAGTGCAAAAAGTAAATTCTCTTCTTGATGTTGAATCTAGTGAAGGGGTCCAAATGGTAGGAATATGTGGCACTGGTGGAATAGGAAAATCAACAATTGCTCGAGCAGTATGCAGTTTGATTGTGGACTCATTTGAAGGGTTTTGTTTTCTTGCTGATGTCAGAGAAAATTCAATTAATCATGGCCTAGTGTATCTCCAGGAAATACTTCTTTCTGAAATGCTGGAGGAAGACGTTAAATTAAGAGATGTTAATAAAGGAATTCCAATAATAAAGCATAGGCTCCACAAAAAGAAGGTTCTCCTTGTTCTTGATGATGTTGATAAGCTAAAGCAATTACAAGCAATTGCTGGGGGACTTGATTGGTTCGGTTCGGGTAGTAGAATCATAGTAACAACAAGGGATAAGCATTTGCTAGTAAGCCATGGTGTTGAAAGAATTTATGAGGTAGACTTTTTAAATAGAGAAGAAGGTCTTGAATTGCTTAAATGGCATGCCTTTAAGCAGATTAGAGTTGATGCAAGTTACATGGACATTTTAAACAATGTGGTATTCTATGCTTGTGGTCTTCCATTGGCTTTGGAAGTTATTGGTTCCAATTTGTTTAGTAGGGAAATAAATTATTGGAATTCCGCATTAGAAAGTTTTCATAGTATTCCAATTAGGGAGATCCAACGAATTCTGAAGGTAAGCTATGATGCCTTGGAGGAATACGAGCAGGAAATTTTTCTTGACATTGCTTGTTGCTTTAAAGGTGACAGTTTTGAATATGTAAGAAGTGCTTTGTACGCACGTGGTATATGCCCAGATTATGGTGTTAAGGTCTTGATTGATAAGTGTCTGATAAAGATTAATCATGGTAAGGTGACTATGCATGATTTGATTCAAGCCATGGGTAAAGAAATTGTGCGACAAAAATCACCATATGAGCCTGGAAAGCGCACTAGGTTATGGTTTCATAAAGACATTCTTAATGTATTGGAAGAAAACAAGGGTTCTGGGAAGATTGAAGCCATAAATCTAGACATGCCTGGAGATATGGTGATTGATTGGAGTGGAAAGGCCTTCAAAAAGATGCGAAATCTTAAGATACTTATCATCAGAAATGCACAGTTTTCTACTGGTCCCAACTATCTCCCCAACAGTTTAAGAGTGTTGGATTGGAAAGGATATCCTTGTCCATCTTTACCGTCTGACTTTAATCCCAGGGAGCTAATTATCCTCAAAATGCCAGAAAGTTTTCTCAAACGTGATGTACTACTTAAGAAGTTTCAATCTTTGAGCGTCCTGAATTTCAAAGGTTGCAAATTTTTAAGACGGGTTTCTGACTTATCTGCAGTCCCAGATTTGAGGGAATTGTGTTTGGAAGGCTGCAACAAGTTAACTGAAGTTCACGTGTCCATTGGATTTCTTAGTAAACTTAAAAGGTTGAGTGTTAAACACTGTAAGAAGCTCAAGGCCTTTCCAAGTATCAAGTTAACATCCTTGGAGTTTCTTGACCTTTCTGGGTGCTCCAGCCTCACAAGATTCCCAGAAATATTAGGAATGATGGAAAATATTAAAGATGTCTGTTTGGACCATAGTGGCATAGAAGAATTGCCTTTGTCATTCAAAAACCTAGTTAATTTAGAAAAATTAAAACTTTCATTTTGTAGAAGTATTGAAAAAATTGGAGGTATTCCACCGAAGCTAAAAGAATTGTCGGCAATAAACCTTGATTGGTACTCACACTTGAGCTTAGAGTCTCGTAGCATTTTACTGAGCCAGGCTTTACATGAGGTTGATGGCTTGAAATTCATAGTAGAAGAAGATAAGACCCCAGAATGGTTTGACCACTACGTTGAGGGAGATTCATGGTCTTTTTGGTTCCAAAAGGAATTCCCAAACATGGCTGTATGTTTTGGTGCATTAATAGAAGACCAATGGCACACACCACCAAAGCTGCTTATTGACGTCCGAGTTAATGGCACAGATGTTGGATTTCCAGAAGGACAAACAATTTTTGCACCACTCACAACACCACATGTCTTTTTGTTTGATTTGCGCGGGCTTATTGTTGAGGATAAACTGAAATATGTAGTTTCAGAGCGTGAATGGAACCACGTGGAGATATCCTGTGTCTTGAGTTACATAAAATGCTACCAACCGGGGGTATTGAATGGAATATATGGTATAGCAGGGGCAAAATGGTGTGGAGTATATGTGTACAAGCAAAAATCCAGAATGGAACATATTCGATTCATAAATCATAGCCACAAAGCAGACCCTGAGTTATTCAAAGGATCTTCCCTGAATCCAGACAGTTTTGCTAAGCTAGTCCTGCGTCAAATGGAGTGGCCCCACGTCAACTTCAAAGTCATCCAATACAATTGCCACAATGCAGTCATGTCCCTTCTATCCAAACCCATTACTGAATTGAGAAAAAGACAGAGGGACAGGAGAGATCAGAGATCTATCAACATGGGTCCCACCTCCTCTCACACGTTCTCTTCCCTCTCCCCGTTGGATGAGAAAGGATGA 3117 0.3876 MTGESPFSPSFPHGWTYDIFLNFRGEDSRFDFARNLYEALQQKGIHTFLDNERLRKGEKIAPSLLKAIQESRMAITIFSRNYASSTFCLDELVQIIEYINKKGRLVLPIFYDVDPSEVRHQRKNYREVFAQHERWLRNDKEKVQKWRRALQDVANLSGFHFKPGDQYEYAFIKEIVKEVTRKMNRKPLHIADYPVGLEYRVQKVNSLLDVESSEGVQMVGICGTGGIGKSTIARAVCSLIVDSFEGFCFLADVRENSINHGLVYLQEILLSEMLEEDVKLRDVNKGIPIIKHRLHKKKVLLVLDDVDKLKQLQAIAGGLDWFGSGSRIIVTTRDKHLLVSHGVERIYEVDFLNREEGLELLKWHAFKQIRVDASYMDILNNVVFYACGLPLALEVIGSNLFSREINYWNSALESFHSIPIREIQRILKVSYDALEEYEQEIFLDIACCFKGDSFEYVRSALYARGICPDYGVKVLIDKCLIKINHGKVTMHDLIQAMGKEIVRQKSPYEPGKRTRLWFHKDILNVLEENKGSGKIEAINLDMPGDMVIDWSGKAFKKMRNLKILIIRNAQFSTGPNYLPNSLRVLDWKGYPCPSLPSDFNPRELIILKMPESFLKRDVLLKKFQSLSVLNFKGCKFLRRVSDLSAVPDLRELCLEGCNKLTEVHVSIGFLSKLKRLSVKHCKKLKAFPSIKLTSLEFLDLSGCSSLTRFPEILGMMENIKDVCLDHSGIEELPLSFKNLVNLEKLKLSFCRSIEKIGGIPPKLKELSAINLDWYSHLSLESRSILLSQALHEVDGLKFIVEEDKTPEWFDHYVEGDSWSFWFQKEFPNMAVCFGALIEDQWHTPPKLLIDVRVNGTDVGFPEGQTIFAPLTTPHVFLFDLRGLIVEDKLKYVVSEREWNHVEISCVLSYIKCYQPGVLNGIYGIAGAKWCGVYVYKQKSRMEHIRFINHSHKADPELFKGSSLNPDSFAKLVLRQMEWPHVNFKVIQYNCHNAVMSLLSKPITELRKRQRDRRDQRSINMGPTSSHTFSSLSPLDEKG 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1415g00008 1038 SUPERFAMILY "Winged helix" DNA-binding domain 422 527 IPR036390 -
Pral1415g00008 1038 Gene3D - 181 345 IPR027417 -
Pral1415g00008 1038 SUPERFAMILY L domain-like 504 777 - -
Pral1415g00008 1038 Gene3D Ribonuclease Inhibitor 691 789 IPR032675 -
Pral1415g00008 1038 Gene3D Ribonuclease Inhibitor 546 690 IPR032675 -
Pral1415g00008 1038 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 758 IPR044974 GO:0006952
Pral1415g00008 1038 MobiDBLite consensus disorder prediction 1018 1032 - -
Pral1415g00008 1038 SMART AAA_5 215 352 IPR003593 GO:0016887
Pral1415g00008 1038 Pfam TIR domain 17 186 IPR000157 GO:0007165
Pral1415g00008 1038 PRINTS Disease resistance protein signature 293 307 - -
Pral1415g00008 1038 PRINTS Disease resistance protein signature 690 706 - -
Pral1415g00008 1038 PRINTS Disease resistance protein signature 218 233 - -
Pral1415g00008 1038 PRINTS Disease resistance protein signature 386 400 - -
Pral1415g00008 1038 Gene3D - 13 180 IPR035897 -
Pral1415g00008 1038 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Pral1415g00008 1038 MobiDBLite consensus disorder prediction 1006 1038 - -
Pral1415g00008 1038 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Pral1415g00008 1038 SMART till_3 16 156 IPR000157 GO:0007165
Pral1415g00008 1038 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 159 IPR035897 -
Pral1415g00008 1038 Gene3D - 351 435 IPR042197 -
Pral1415g00008 1038 Pfam NB-ARC domain 198 435 IPR002182 GO:0043531
Pral1415g00008 1038 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 445 IPR027417 -
Pral1415g00008 1038 Coils Coil 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1415g00008 Pral-Chr1415 67474 72056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1415g00008 9 771 WRKY Transcription Factor Family AT4G12020 32.614 3.85e-94 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1415g00008 - - pcin:129295008 1144.8