Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1415g00003 ATGGCTGAGCAACCACCATTTTCCTCTTCCTTCTCTCATGGGTGGACTTATGATGTCTTTCTCAATTTTAGAGGTGAAGATACTCGCTTTGATTTTGCCAGAAACCTCTACGAGGCCTTGCAGCAAAAGGGTATCCGTACTTTTTTAGACAACGAAAGGCTTAGAAAAGGAGAAAAGATTACACCGTCACTTCTCAAAGCAATCCAGGAGTCTAGAATGGCTATCTCTATTTTCTCTAGAAACTATGCTTCCTCTACATTTTGTTTAGATGAGCTTGTTCAGATCCTTGAGCATATAAATAAAAAAGATAGATTGGTTCTGCCCATTTTTTATAACGTGGATCCATCAGAAGTACGACGTCAAAGAAAAAGTTACAGAGAACCATTTGTTCAGCATGAGAGGAGGTTTAAAAATGACAAGGAGAAGGTGCAAAAATGGAGGCGGGCTCTACAAGATGCTGCTAATCTCTCGGGTTTCCATTTCAAACCTGGATGTCAATATGAATATGCTTTTATCAAAGCGATTGTTAAAGAGGTCACTAGGAGAATCAACCGCAAGCCTTTACACATTGCCAATTTTCCGGTTGGACTTGAGTATCGAGTGCGAAAGGTAAATTCTCTTCTAAATGTTGAATCTAATGAAGGGGTCCAAATAGTAGGAATATGTGGCACTGGTGGAATAGGAAAATCAACAATTGCTCGAGCAGTATGCAGCTCGATTGTGGACTCATTCGAAGGCTTTTGTTTTCTTGCTGATGTGAGAGAAAATTCAATTAATCATGGCCTAGCATATGTCCAGGAAATGCTTCTTTCTGAACTGTTGGAGGAGGACATAAAGTTAAGAGATGTTAATAAAGGAATTCCAATAATAAAGCATAGGCTCCACAAAAAGAAGGTTCTTCTTGTTCTTGATGATGTTGATAAGCTAAAGCAATTACAAGCAATTGCTGGAGGACTTGATTGGTTCGGTTCTGGTAGTAGAATTATTTTAACAACAAGGGATAAGCATTTGCTAGTAAGCCATGGTGTTGAAAGAATTTATGAGGTAGACTGTTTAAATAAAGAAGAAGGTCTTGAATTGCTTAAATGGCTTGCTTTTAAACGAAGTAGTGTTGATGCAAGTTACATGGACGTTTTAAACAATGTCGTACTCTATGCTGGTGGTCTTCCATTGGCGTTGGAAGTTATAGGTTCCAACTTGTTCGGTAGAGAAACAAATGATTGGAATTCCGCATTAGAAAGTTATCATAGTATGCCAATTAAAGAGATCCAACAAATCTTGAAGGTAAGCTATGATGCTTTGGAGGAATACGAGCAGGAAATTTTTCTTGACATTGCTTGTTGCTTTAAAGGTGACAGTTTTGAATATGTAAGAAGTGCTTTGTACGCACGTGGTATATGCCCAGATTATGGTGTTAAGGTATTGATTGATAAGTGTCTGATAAAGATTAATCATGGTAAGGTGACTATGCATGATTTGATTCAAGCCATGGGTAAAGAAATTGTGCGGCAGAAGTCACTATATGAGCCTGGAAAGCGCACTAGGTTATGGTTTCATAAAGACATTCTTAATGTGTTGGAAGAAAACAAGGGTTCTGGGAAGATTGAAGCCATAAATCTAGACATGCCTGGAGATATGGTGATTGATTGGAGTGGAAAGGCCTTCAAAAAGATGCCAAATCTTAAGATACTTATTATCAGAAATGCACAGTTTTCTACTGGCCCCAAGTATCTCCCCAACAGTTTAAGAGTGTTGGACTGGAAGGGATATCCTTGTCCAACTTTACCGCCTGACTTCAACCCCCGGGAGCTAATTATCCTCAAAATGCCAGAAAGTTTCCTCAAACGTGATGTACTACTCAAGGCATGCAGAAAGTTTCAGTCTTTGAGCGTCATCAATTTCAGAGGTTGCAAATATTTAAGACGAGTTTCTGACTTATCTGCTGCCCCAGATTTGAGGGAATTGTGTTTGGAAGGCTGCAACAAGTTAACTGAAGTTCACATGTCCATTGGATTTCTTGGTAAACTTAAAAGGTTGAGTGTTAAACACTGCAGGAAGCTCAAGACCTTTCCAAGTATCAAGTTAACATCCCTAGAGTTTCTTGACCTTTCTGGGTGCTCCAGCCTCACAAGATTCCCAGAAATATTAGGAAAGATGGAAAATATCAAAGATGTCTGTTTGGATGATAGTGGTATAGAAGAATTGCCTTTGTCATTCAAAAACCTTATTAAATTAGAAAAACTAGAACTTTCATTTTGTAGAAGTATTGAAAAAATTAGAGGTATTCCACCAAACCTAAGAGAACTGTCAGCAATAAACCTTGATTGGTACTCACATTTGAGCGTAGAGTCTCGTACCATTTTACTGCATCAGGTTTTACATGAAGTTGATGGATTGAAATTCGTAGTAGAAGAAGACCAGACCCCAGCATGGTTTGACCACTATGTTGAGGGACATTCATTATCTTTTTGTTTCCAAAAGGAATTCCCAAACATGGCTGTATGTTTTGGTACATTAATAGAGGACCTATGGCACACACCACCAACACTGCTTATTGACGCCCGAGTTAATGGCACAAATGTTGGGTTTCCAGAAGGACAAACAATTTTTGCGCCACTTACAACACCACATATATTTATGTTTGATTTGCGACAGCTCATTCTTGAGGATAAACTGGAAAGTGTAGTTTCAGAGCGTGGATGGAACCACGTGGAGATATCCTGTGTCTTGGGTTACATAAATTGCTACCATCCATGGGGCTTGGATGAAATATATGGTATGGCAAGGGCAAAATGGAGCGGAGCATATGTATACAAGCAAAAATCCAGAATGGAAGATATTCGATTCATAAGTCATAGCCAGGAAGCAGTATCTGAGCTATTGAGTGAATCTTCCATGAATCCAGACAGTTTTGCTGAGCTAACCCTGCGTAGAATGAAGTGTCAATACATCAATGTCAAAGTCAGCAATAATGCAGTCGCGTCCCTTTCATCCAAACCCATTACTGAATTGAGAAAAAGAAAGAGGGACGGGAGAGATCTATCAATATGGATCCCACCTCCTTCAATTGCTTCTGTTCACTCGTTACGCTGTGAGGGTATTTCAGAAGGTTTACTACTTGCCCATGCCATGCTGATAGATCTACAGCTGTGTTTGTGGTTCCGTGTTAATGTTAACAAGGGTGGTTTCATTAAATGTTTGTGCTTGGCCATTTTGGAGTTGGCTCCTATAGCATATCTCTTCGCCTTGGCTTTTAGCTACAGTTTTGCTCTTGCTGTTGGAAATTGA 3288 0.3945 MAEQPPFSSSFSHGWTYDVFLNFRGEDTRFDFARNLYEALQQKGIRTFLDNERLRKGEKITPSLLKAIQESRMAISIFSRNYASSTFCLDELVQILEHINKKDRLVLPIFYNVDPSEVRRQRKSYREPFVQHERRFKNDKEKVQKWRRALQDAANLSGFHFKPGCQYEYAFIKAIVKEVTRRINRKPLHIANFPVGLEYRVRKVNSLLNVESNEGVQIVGICGTGGIGKSTIARAVCSSIVDSFEGFCFLADVRENSINHGLAYVQEMLLSELLEEDIKLRDVNKGIPIIKHRLHKKKVLLVLDDVDKLKQLQAIAGGLDWFGSGSRIILTTRDKHLLVSHGVERIYEVDCLNKEEGLELLKWLAFKRSSVDASYMDVLNNVVLYAGGLPLALEVIGSNLFGRETNDWNSALESYHSMPIKEIQQILKVSYDALEEYEQEIFLDIACCFKGDSFEYVRSALYARGICPDYGVKVLIDKCLIKINHGKVTMHDLIQAMGKEIVRQKSLYEPGKRTRLWFHKDILNVLEENKGSGKIEAINLDMPGDMVIDWSGKAFKKMPNLKILIIRNAQFSTGPKYLPNSLRVLDWKGYPCPTLPPDFNPRELIILKMPESFLKRDVLLKACRKFQSLSVINFRGCKYLRRVSDLSAAPDLRELCLEGCNKLTEVHMSIGFLGKLKRLSVKHCRKLKTFPSIKLTSLEFLDLSGCSSLTRFPEILGKMENIKDVCLDDSGIEELPLSFKNLIKLEKLELSFCRSIEKIRGIPPNLRELSAINLDWYSHLSVESRTILLHQVLHEVDGLKFVVEEDQTPAWFDHYVEGHSLSFCFQKEFPNMAVCFGTLIEDLWHTPPTLLIDARVNGTNVGFPEGQTIFAPLTTPHIFMFDLRQLILEDKLESVVSERGWNHVEISCVLGYINCYHPWGLDEIYGMARAKWSGAYVYKQKSRMEDIRFISHSQEAVSELLSESSMNPDSFAELTLRRMKCQYINVKVSNNAVASLSSKPITELRKRKRDGRDLSIWIPPPSIASVHSLRCEGISEGLLLAHAMLIDLQLCLWFRVNVNKGGFIKCLCLAILELAPIAYLFALAFSYSFALAVGN 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1415g00003 1095 Gene3D - 182 345 IPR027417 -
Pral1415g00003 1095 SUPERFAMILY "Winged helix" DNA-binding domain 421 527 IPR036390 -
Pral1415g00003 1095 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 159 IPR035897 -
Pral1415g00003 1095 Gene3D - 351 435 IPR042197 -
Pral1415g00003 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 445 IPR027417 -
Pral1415g00003 1095 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Pral1415g00003 1095 SMART till_3 16 156 IPR000157 GO:0007165
Pral1415g00003 1095 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 761 IPR044974 GO:0006952
Pral1415g00003 1095 Pfam NB-ARC domain 198 436 IPR002182 GO:0043531
Pral1415g00003 1095 SUPERFAMILY L domain-like 534 782 - -
Pral1415g00003 1095 Gene3D - 10 181 IPR035897 -
Pral1415g00003 1095 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Pral1415g00003 1095 Pfam TIR domain 17 184 IPR000157 GO:0007165
Pral1415g00003 1095 PRINTS Disease resistance protein signature 218 233 - -
Pral1415g00003 1095 PRINTS Disease resistance protein signature 293 307 - -
Pral1415g00003 1095 PRINTS Disease resistance protein signature 693 709 - -
Pral1415g00003 1095 PRINTS Disease resistance protein signature 386 400 - -
Pral1415g00003 1095 Coils Coil 420 440 - -
Pral1415g00003 1095 Gene3D Ribonuclease Inhibitor 547 693 IPR032675 -
Pral1415g00003 1095 Gene3D Ribonuclease Inhibitor 694 784 IPR032675 -
Pral1415g00003 1095 SMART AAA_5 215 352 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1415g00003 Pral-Chr1415 23396 34938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1415g00003 11 774 WRKY Transcription Factor Family AT4G12020 32.398 5.30e-92 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1415g00003 - - pcin:129295008 1107.05