LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1415g00002	ATGGCTGGGCAATCACCATTTTCCCTGTCCTCCTCTTATGGATGGACTTATGATGTGTTTCTCAATTTCAGAGGTGAAGATTCTCGCTTTGATTTTGCTCGAAACCTCTACGAGGCTTTGCAACAAAAGGGTATCCATACTTTTTTAGACGATGAAAGGCTTAGGAAAGGAGAAAAGATTACGCCTTCACTTCTCAAAGCAATCCAAGAGTCTAGGATGGCTATTACTATTTTCTCTAGAAACTATGTTTCCTCTACATCTTGCTTAGATGAGCTTGTTCAGATCCTTGAGCATATAAACAAAAAAGGTAGACTGGTTTTGCCCATTTTTTATGACGTGGATCCATCAAGAGTACGACGTCAAAGAAAAAATTATAGAGAAGTATTTGCTCAGCACGAGAGGAGGTTTAAAAATGACAAGGAGAAGGTGCAAAAATGGAGGCAGGCTCTACAAGATGCTGCTAATCTCTCGGGTTTCCATTTTAAGCCTGGATATCAATATGAATATGCTTTGATTAAAGCAATTGTTAAAGAGGTCACTAAGAGAGTTAACCGCAAGCCTTTACACATTGCTGATTATCCAGTTGGATTTGAGTATCGAGTGCGAAAAGTAAATTCTCTTCTAAATGTTGAATCTAATGAAGGGGTCCAAATGGTAGGAATATGTGGCACTGGTGGAATAGGAAAATCAACAATTGCTCGAGCAGTATGCAGTTCGATTGTGGACTCATTCGAAGGCTTTTGTTTCCTTGCTGATGTTAGAGAAAATTCAATTAATCATGGCCTAGCATATGTCCAGGAAATGCTTCTTTCTGAACTGTTGGAGGAGGACATCAAGTTAAGAGATGTTAATAAAGGAATTCCAACAATAAAGCATAGGCTCCACAAAAAGAAGGTTCTTCTTGTTCTTGATGATGTTGATAAGCCAAAGCAATTACAAGCAATTGCTGGGGGACTTGATTGGTTTGGTTCTGGTAGTAGAATCATTGTAACAACAAGGGATCAGCATTTGCTAGTAAGCCATGGTGTTAAAAGAATTTATGAGGTAGACTGTTTAAATAAAGAAGAAGGTCTCGAATTGCTTAAATGGCATGCTTTTAAACAAAGTAGTGTTGATTCAAGTTGCATGGGCGTTTTAAACAATGTAGTACTCTATGCTGGTGGTCTTCCATTGGCGTTGGAAGTTATAGGTTCCAACTTGTTCGGTAGAGAAACAAATGATTGGAATTCTGCATTAGAAAGTTATCGTAGTATTCCAATTAAAGAGATCCAACAAATCCTGAAGGTAAGCTATGATGCTTTGGAGGAATACGAACAGGAAATCTTTCTTGACATTGCTTGCTGCTTTCAAGGTGACAGTTTTGAATATGTAAGAAGTGCATTGTATGCACGTGGTATATGCCCGGATTATGGTGTTCAAGTGTTGATTGATAAATGTCTCATAAAGATGAATCATGGTAAGGTGACGATGCACGATTTGATTCAAGCCATGGGTAAAGAAATTGTGCGACAGAAATCACCATATGAGCCTGAAAAGCGCACTAGGTTATGGTTTCATAAAGACATTCTTAATGCGTTGGAAGAAAACAAGGGTTCTGGGGAGATTGAAGCCATAAATCTAGACATGCCCGGAGATATGGTGATTGATTGGAATGGAAGGGCCTTCAAAAAGATGCCAAATCTTAAGATTCTTATTATCAGAAATGCACAGTTTTCTACAGGTCCCAAGCATCTCCCCAACAGTTTAAGAGTGTTGGATTGGAAGGGATATCCTTGTCCATCTTTACCGTCTGATTTTAACCCCAAGGAACTAATTATCCTCAAAATGCCGGAAAGTTTCCTCCAACCGGATGTCCTACTCAGCGCATGCAGAGTATTGGCCCTTTTGATCATTATTTCTTTTTATAATGAAGCAAGAATACGTCAAAATTTGTTCCATGCAATGATTGCTGTAAATATTAGTATTTGTGTTTTTTAA	1977	0.3849	MAGQSPFSLSSSYGWTYDVFLNFRGEDSRFDFARNLYEALQQKGIHTFLDDERLRKGEKITPSLLKAIQESRMAITIFSRNYVSSTSCLDELVQILEHINKKGRLVLPIFYDVDPSRVRRQRKNYREVFAQHERRFKNDKEKVQKWRQALQDAANLSGFHFKPGYQYEYALIKAIVKEVTKRVNRKPLHIADYPVGFEYRVRKVNSLLNVESNEGVQMVGICGTGGIGKSTIARAVCSSIVDSFEGFCFLADVRENSINHGLAYVQEMLLSELLEEDIKLRDVNKGIPTIKHRLHKKKVLLVLDDVDKPKQLQAIAGGLDWFGSGSRIIVTTRDQHLLVSHGVKRIYEVDCLNKEEGLELLKWHAFKQSSVDSSCMGVLNNVVLYAGGLPLALEVIGSNLFGRETNDWNSALESYRSIPIKEIQQILKVSYDALEEYEQEIFLDIACCFQGDSFEYVRSALYARGICPDYGVQVLIDKCLIKMNHGKVTMHDLIQAMGKEIVRQKSPYEPEKRTRLWFHKDILNALEENKGSGEIEAINLDMPGDMVIDWNGRAFKKMPNLKILIIRNAQFSTGPKHLPNSLRVLDWKGYPCPSLPSDFNPKELIILKMPESFLQPDVLLSACRVLALLIIISFYNEARIRQNLFHAMIAVNISICVF	658

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1415g00002	658	Gene3D	-	351	435	IPR042197	-
	Pral1415g00002	658	SMART	till_3	16	156	IPR000157	GO:0007165
	Pral1415g00002	658	ProSiteProfiles	TIR domain profile.	15	183	IPR000157	GO:0007165
	Pral1415g00002	658	Pfam	TIR domain	17	186	IPR000157	GO:0007165
	Pral1415g00002	658	Gene3D	-	181	345	IPR027417	-
	Pral1415g00002	658	PRINTS	Disease resistance protein signature	386	400	-	-
	Pral1415g00002	658	PRINTS	Disease resistance protein signature	218	233	-	-
	Pral1415g00002	658	PRINTS	Disease resistance protein signature	556	572	-	-
	Pral1415g00002	658	PRINTS	Disease resistance protein signature	293	307	-	-
	Pral1415g00002	658	SUPERFAMILY	L domain-like	540	622	-	-
	Pral1415g00002	658	Pfam	NB-ARC domain	198	435	IPR002182	GO:0043531
	Pral1415g00002	658	SUPERFAMILY	"Winged helix" DNA-binding domain	421	526	IPR036390	-
	Pral1415g00002	658	SMART	AAA_5	215	352	IPR003593	GO:0016887
	Pral1415g00002	658	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	181	445	IPR027417	-
	Pral1415g00002	658	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	17	615	IPR044974	GO:0006952
	Pral1415g00002	658	SUPERFAMILY	Toll/Interleukin receptor TIR domain	10	159	IPR035897	-
	Pral1415g00002	658	Gene3D	-	13	180	IPR035897	-
	Pral1415g00002	658	FunFam	Disease resistance protein (TIR-NBS-LRR class)	13	185	-	-
	Pral1415g00002	658	Coils	Coil	420	440	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1415g00002	Pral-Chr1415	17375	20084	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1415g00002	17	612	WRKY Transcription Factor Family	AT4G12020	31.613	1.17e-69	245

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1415g00002	-		-	pcin:129295008	840.106