Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1414g00008 | ATGTCCGTGAAGCCTTTCTCCCATTTCCCGCGGAGCAAACTTGGCGTTTCTTTCATTTACGGAGCCAATAGTGTCAATTGCAAAACCAAAACCCGGTGTTTATTTCCCTTTACCAGCTTGCAAAATGCTAATTCGAGGTCCGATAAGGGGTGGGAATGTAGGAATTTGAAAGCTTCTTGCCAATTCTTTGCTTCAGCGAATGAGAAGCAGGGCAACGTTGGTTCTGGGTTACGGAAGGCGTTTTCCTTTGCCCAGTCCATTTCACCTGGTGGTAGCTGGTGGAACTTATCTGTAAATAAGCAAGACGAGATTGCAGCGGCGAAGCCAATGACGGCACTGCTCGCTCTTCGCCGAATGTGGATTTTAATTTCCAGCGAGAAATGGATTTTACTTTTGGCGTTTGGCTCCCTTGTCGTTGCTGCCGTGTCAGAGATCTCCATGCCAAGTATATTGGCTGCGTCAATATTTTCGGCACGGAGTGGCGAGACCGTGGGGTTCTACCGGAAGGCACAGTTCTTACTTGTTCTGTGTTTCACTTCAGGCATATGCAGTGGTTTGCGAAGCGGCTGCTTTGGAATTTTAAATGTAATCCTGGTAAAGCGTCTCCGGGAAAATCTGTATGCAGCTCTTCTGTTTCAGGACATATCCTATTTTGATAGAGAGCAAGTTGGTGACTTGACAAGCAGGCTTTCAGCAGATTGTCAACGACTATCTTATGTCATAGGAAATGATCTACATTTGATATTTCGCAACACTTTACAGGGAACAGGGGCAATAATTAATTTGCTGATTTTATCATGGCCTCTGGCATTGTCTGCCTTGGTGATTTGCTCTCTTTTGTCCTCAATTTTCCTGGTTTATGGCCAGTATCAAAGAAAAGCAGCAAAGTGGACCCAAGATTTCACAGCTAGTGCCAATCAAGTAGCACAGGAAACCCTTTCACTGGTAAGAACAGTCCGAGCCTATGGCACTGAAGTAGAAGAAATTGGAAGGTACAAGCAATGGCTTCAGAGATTAGCATTTATAAACACACGAGAGAGTTTGGCTTATGGTTTTTGGAGCCTGAGTTTTAACACTCTTTATCGTTCAACTCAGGTACTTGCGGTGCTGTTAGGAGGAATGTCCGTTCTCTGTTGTCGTGTAACTGCAGAGCAGCTTACTAAGTATGTACTATACTGTGAGTGGCTGATTTTTGCTACTTGGAGGGTGACAAATAGCTTGTCATCATTCCTGCAGTCAATTGGAGCATGTGAAAAAGTTTTCCAAATGATGGATCTTTTGCCCAGTGACCAATTTTTATCCAAAGGAGTGAAGTTGCGGCGGTTAAGGGGACGTATTAATTTTGTAAATGTATCATTTTGTTATCCTACAAGGATCACGGTGCCTATTCTAGAACGCTTAAACTTCTGTGTAGAACCAAATGAAATGATTGCAATAGTTGGTCTTAGTGGTAGCGGAAAGAGCACATTACTCAATCTTTTACTTCGTTTATATGAGCCGAGTAATGGTCAGATTTACATTGATGGGTTCCCTCTCGGAGAATTGGATATCAGGTGGCTGAGACAAAACATTGGCTACATAGCACAGGAACCGCATCTCTTTCACATGGACATCAAGTCAAATATAAAATACGGTTGCCCTAGGGACATTAAACAGGAAGATATTGAACGAGCAGCAAAGCAGGCCTATGCTCATGACTTCATTTCATTGTTTCCCAACGGCTATGAAACCATTGTTGATGATAATTCACTCAGCGGGGGACAAAAGCAACGAATTGCCATTGCTAGGGCCATTCTTAGAGACCCTGTTATTATGATACTGGATGAAGCAACCAGTGCTCTAGATTCTGAGAGTGAGCATTATATCAAGGAGGTTTTATATCCATTGAGAGGGGGAACTAAAGAAAGAACCACCATTGTCATAGCACATAGCTGCTGA | 1938 | 0.4334 | MSVKPFSHFPRSKLGVSFIYGANSVNCKTKTRCLFPFTSLQNANSRSDKGWECRNLKASCQFFASANEKQGNVGSGLRKAFSFAQSISPGGSWWNLSVNKQDEIAAAKPMTALLALRRMWILISSEKWILLLAFGSLVVAAVSEISMPSILAASIFSARSGETVGFYRKAQFLLVLCFTSGICSGLRSGCFGILNVILVKRLRENLYAALLFQDISYFDREQVGDLTSRLSADCQRLSYVIGNDLHLIFRNTLQGTGAIINLLILSWPLALSALVICSLLSSIFLVYGQYQRKAAKWTQDFTASANQVAQETLSLVRTVRAYGTEVEEIGRYKQWLQRLAFINTRESLAYGFWSLSFNTLYRSTQVLAVLLGGMSVLCCRVTAEQLTKYVLYCEWLIFATWRVTNSLSSFLQSIGACEKVFQMMDLLPSDQFLSKGVKLRRLRGRINFVNVSFCYPTRITVPILERLNFCVEPNEMIAIVGLSGSGKSTLLNLLLRLYEPSNGQIYIDGFPLGELDIRWLRQNIGYIAQEPHLFHMDIKSNIKYGCPRDIKQEDIERAAKQAYAHDFISLFPNGYETIVDDNSLSGGQKQRIAIARAILRDPVIMILDEATSALDSESEHYIKEVLYPLRGGTKERTTIVIAHSC | 645 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1414g00008 | 645 | PANTHER | ABC TRANSPORTER B FAMILY | 106 | 643 | IPR039421 | - | |
Pral1414g00008 | 645 | SUPERFAMILY | ABC transporter transmembrane region | 117 | 430 | IPR036640 | GO:0005524|GO:0016020 | |
Pral1414g00008 | 645 | SMART | AAA_5 | 473 | 645 | IPR003593 | GO:0016887 | |
Pral1414g00008 | 645 | Pfam | ABC transporter | 464 | 612 | IPR003439 | GO:0005524 | |
Pral1414g00008 | 645 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 437 | 644 | IPR027417 | - | |
Pral1414g00008 | 645 | Gene3D | ABC transporter type 1, transmembrane domain | 111 | 430 | IPR036640 | GO:0005524|GO:0016020 | |
Pral1414g00008 | 645 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 131 | 412 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Pral1414g00008 | 645 | Pfam | ABC transporter transmembrane region | 131 | 392 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Pral1414g00008 | 645 | CDD | ABC_6TM_TAP | 133 | 420 | - | - | |
Pral1414g00008 | 645 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 446 | 645 | IPR003439 | GO:0005524 | |
Pral1414g00008 | 645 | ProSitePatterns | ABC transporters family signature. | 584 | 598 | IPR017871 | GO:0005524|GO:0016887 | |
Pral1414g00008 | 645 | Gene3D | - | 436 | 645 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1414g00008 | Pral-Chr1414 | 18948 | 26074 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1414g00008 | 201 | 643 | Calmodulin-binding Proteins | AT2G36910 | 34.549 | 1.65e-61 | 220 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1414g00008 | - | - | pcin:129294067 | 1113.6 |