Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1414g00007 ATGGATTTTACTTTTGGCGTTTGGCTCCCTTGTCGTTGCTGCCTGCAGGTGTCAGAGATCTCCATGCCAAGTATATTGGCTGCGTCAATATTTTCGGCACGGAGTGGCGAGACCGTGGGGTTCTACCGGAAGGCACAGTTCTTACTTGTTCTGTGTTTCACTTCAGGCATATGCAGTGGTTTGCGAAGCGGCTGCTTTGGAATTTTAAATGTAATCCTGGTAAAGCGTCTCCGGGAAAATCTGTATGCAGCTCTTCTGTTTCAGGACATATCCTATTTTGATAGAGAGCAAGTTGGTGACTTGACAAGCAGGCTTTCAGCAGATTGTCAACGACTATCTTATGTCATAGGAAATGATCTACATTTGATATTTCGCAACACTTTACAGGGAACAGGGGCAATAATTAATTTGCTGATTTTATCATGGCCTCTGGCATTGTCTGCCTTGGTGATTTGCTCTCTTTTGTCCTCAATTTTCCTGGTTTATGGCCAGTATCAAAGAAAAGCAGCAAAGTGGACCCAAGATTTCACAGCTAGTGCCAATCAAGTAGCACAGGAAACCCTTTCACTGGTAAGAACAGTCCGAGCCTATGGCACTGAAGTAGAAGAAATTGGAAGGTACAAGCAATGGCTTCAGAGATTAGCATTTATAAACACACGAGAGAGTTTGGCTTATGGTTTTTGGAGCCTGAGTTTTAACACTCTTTATCGTTCAACTCAGGTACTTGCGGTGCTGTTAGGAGGAATGTCCGTTCTCTGTTGTCGTGTAACTGCAGAGCAGCTTACTAAGTATGTACTATACTGTGAGTGGCTGATTTTTGCTACTTGGAGGGTGACAAATAGCTTGTCATCATTCCTGCAGTCAATTGGAGCATGTGAAAAAGTTTTCCAAATGATGGATCTTTTGCCCAGTGACCAATTTTTATCCAAAGGAGTGAAGTTGCGGCGGTTAAGGGGACGTATTAATTTTGTAAATGTATCATTTTGTTATCCTACAAGGATCACGGTGCCTATTCTAGAACGCTTAAACTTCTGTGTAGAACCAAATGAAATGATTGCAATAGTTGGTCTTAGTGGTAGCGGAAAGAGCACATTACTCAATCTTTTACTTCGTTTATATGAGCCGAGTAATGGTCAGATTTACATTGATGGGTTCCCTCTCGGAGAATTGGATATCAGGTGGCTGAGACAAAACATTGGCTACATAGCACAGGAACCGCATCTCTTTCACATGGACATCAAGTCAAATATAAAATACGGTTGCCCTAGGGACATTAAACAGGAAGATATTGAACGAGCAGCAAAGCAGGCCTATGCTCATGACTTCATTTCATTGTTTCCCAACGGCTATGAAACCATTGTTGATGATAATTCACTCAGCGGGGGACAAAAGCAACGAATTGCCATTGCTAGGGCCATTCTTAGAGACCCTGTTATTATGATACTGGATGAAGCAACCAGTGCTCTAGATTCTGAGAGTGAGCATTATATCAAGGAGGTTTTATATCCATTGAGAGGGGGAACTAAAGAAAGAACCACCATTGTCATAGCACATAGGCTTTCTACCCTAAAAGCTGCTGACAGGATCTTCGTAATGGATGATGGTCGCATCATTGAGATGGGTAACCACGAAGAACTTCTGCTTAAAGGTGGGCTCTACGCAAAATTGTATAAAGTTCAAACAGATATTTTGACCTAA 1698 0.4223 MDFTFGVWLPCRCCLQVSEISMPSILAASIFSARSGETVGFYRKAQFLLVLCFTSGICSGLRSGCFGILNVILVKRLRENLYAALLFQDISYFDREQVGDLTSRLSADCQRLSYVIGNDLHLIFRNTLQGTGAIINLLILSWPLALSALVICSLLSSIFLVYGQYQRKAAKWTQDFTASANQVAQETLSLVRTVRAYGTEVEEIGRYKQWLQRLAFINTRESLAYGFWSLSFNTLYRSTQVLAVLLGGMSVLCCRVTAEQLTKYVLYCEWLIFATWRVTNSLSSFLQSIGACEKVFQMMDLLPSDQFLSKGVKLRRLRGRINFVNVSFCYPTRITVPILERLNFCVEPNEMIAIVGLSGSGKSTLLNLLLRLYEPSNGQIYIDGFPLGELDIRWLRQNIGYIAQEPHLFHMDIKSNIKYGCPRDIKQEDIERAAKQAYAHDFISLFPNGYETIVDDNSLSGGQKQRIAIARAILRDPVIMILDEATSALDSESEHYIKEVLYPLRGGTKERTTIVIAHRLSTLKAADRIFVMDDGRIIEMGNHEELLLKGGLYAKLYKVQTDILT 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1414g00007 565 Pfam ABC transporter transmembrane region 45 267 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral1414g00007 565 ProSitePatterns ABC transporters family signature. 459 473 IPR017871 GO:0005524|GO:0016887
Pral1414g00007 565 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 48 287 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral1414g00007 565 FunFam Multidrug ABC transporter ATP-binding protein 313 563 - -
Pral1414g00007 565 Gene3D - 319 561 IPR027417 -
Pral1414g00007 565 PANTHER ABC TRANSPORTER B FAMILY 18 558 IPR039421 -
Pral1414g00007 565 CDD ABC_6TM_TAP 13 295 - -
Pral1414g00007 565 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 321 559 IPR003439 GO:0005524
Pral1414g00007 565 Pfam ABC transporter 339 487 IPR003439 GO:0005524
Pral1414g00007 565 Gene3D ABC transporter type 1, transmembrane domain 50 318 IPR036640 GO:0005524|GO:0016020
Pral1414g00007 565 SMART AAA_5 348 536 IPR003593 GO:0016887
Pral1414g00007 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 312 560 IPR027417 -
Pral1414g00007 565 SUPERFAMILY ABC transporter transmembrane region 16 305 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1414g00007 Pral-Chr1414 18394 25820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1414g00007 76 560 Calmodulin-binding Proteins AT2G36910 35.882 6.07e-76 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1414g00007 - - pcin:129294067 969.918