Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1414g00006 ATGGATTTTACTTTTGGCGTTTGGCTCCCTTGTCGTTGCTGCCGTGTCAGAGATCTCCATGCCAAGTATATTGGCTGCGTCAATATTTTCGGCACGGAGTGGCGAGACCGTGGGGTTCTACCGGAAGGCACAGTTCTTACTTGTTCTGTGTTTCACTTCAGGCATATGCAGTGGTTTGCGAAGCGGCTGCTTTGGAATTTTAAATGTAATCCTGGATTTAGGGATGTGGTGCCATCTGATGCTGTGATCATCATTCTGCAGGACATATCCTATTTTGATAGAGAGCAAGTTGGTGACTTGACAAGCAGGCTTTCAGCAGATTGTCAACGACTATCTTATGTCATAGGAAATGATCTACATTTGATATTTCGCAACACTTTACAGGGAACAGGGGCAATAATTAATTTGCTGATTTTATCATGGCCTCTGGCATTGTCTGCCTTGGTGATTTGCTCTCTTTTGTCCTCAATTTTCCTGGTTTATGGCCAGTATCAAAGAAAAGCAGCAAAGTGGACCCAAGATTTCACAGCTAGTGCCAATCAAGTAGCACAGGAAACCCTTTCACTGGTAAGAACAGTCCGAGCCTATGGCACTGAAGTAGAAGAAATTGGAAGGTACAAGCAATGGCTTCAGAGATTAGCATTTATAAACACACGAGAGAGTTTGGCTTATGGTTTTTGGAGCCTGAGTTTTAACACTCTTTATCGTTCAACTCAGGTACTTGCGGTGCTGTTAGGAGGAATGTCCGTTCTCTGTTGTCGTGTAACTGCAGAGCAGCTTACTAAGTATGTACTATACTGTGAGTGGCTGATTTTTGCTACTTGGAGGGTGACAAATAGCTTGTCATCATTCCTGCAGTCAATTGGAGCATGTGAAAAAGTTTTCCAAATGATGGATCTTTTGCCCAGTGACCAATTTTTATCCAAAGGAGTGAAGTTGCGGCGGTTAAGGGGACGTATTAATTTTGTAAATGTATCATTTTGTTATCCTACAAGGATCACGGTGCCTATTCTAGAACGCTTAAACTTCTGTGTAGAACCAAATGAAATGATTGCAATAGTTGGTCTTAGTGGTAGCGGAAAGAGCACATTACTCAATCTTTTACTTCGTTTATATGAGCCGAGTAATGGTCAGATTTACATTGATGGGTTCCCTCTCGGAGAATTGGATATCAGGTGGCTGAGACAAAACATTGGCTACATAGCACAGGAACCGCATCTCTTTCACATGGACATCAAGTCAAATATAAAATACGGTTGCCCTAGGGACATTAAACAGGAAGATATTGAACGAGCAGCAAAGCAGGCCTATGCTCATGACTTCATTTCATTGTTTCCCAACGGCTATGAAACCATTGTTGATGATAATTCACTCAGCGGGGGACAAAAGCAACGAATTGCCATTGCTAGGGCCATTCTTAGAGACCCTGTTATTATGATACTGGATGAAGCAACCAGTGCTCTAGATTCTGAGAGTGAGCATTATATCAAGGAGGTTTTATATCCATTGAGAGGGGGAACTAAAGAAAGAACCACCATTGTCATAGCACATAGGCTTTCTACCCTAAAAGCTGCTGACAGGATCTTCGTAATGGATGATGGTCGCATCATTGAGATGGGTAACCACGAAGAACTTCTGCTTAAAGGTGGGCTCTACGCAAAATTGTATAAAGTTCAAACAGATATTTTGACCTAA 1695 0.4218 MDFTFGVWLPCRCCRVRDLHAKYIGCVNIFGTEWRDRGVLPEGTVLTCSVFHFRHMQWFAKRLLWNFKCNPGFRDVVPSDAVIIILQDISYFDREQVGDLTSRLSADCQRLSYVIGNDLHLIFRNTLQGTGAIINLLILSWPLALSALVICSLLSSIFLVYGQYQRKAAKWTQDFTASANQVAQETLSLVRTVRAYGTEVEEIGRYKQWLQRLAFINTRESLAYGFWSLSFNTLYRSTQVLAVLLGGMSVLCCRVTAEQLTKYVLYCEWLIFATWRVTNSLSSFLQSIGACEKVFQMMDLLPSDQFLSKGVKLRRLRGRINFVNVSFCYPTRITVPILERLNFCVEPNEMIAIVGLSGSGKSTLLNLLLRLYEPSNGQIYIDGFPLGELDIRWLRQNIGYIAQEPHLFHMDIKSNIKYGCPRDIKQEDIERAAKQAYAHDFISLFPNGYETIVDDNSLSGGQKQRIAIARAILRDPVIMILDEATSALDSESEHYIKEVLYPLRGGTKERTTIVIAHRLSTLKAADRIFVMDDGRIIEMGNHEELLLKGGLYAKLYKVQTDILT 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1414g00006 564 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 320 558 IPR003439 GO:0005524
Pral1414g00006 564 FunFam Multidrug ABC transporter ATP-binding protein 312 562 - -
Pral1414g00006 564 Pfam ABC transporter 338 486 IPR003439 GO:0005524
Pral1414g00006 564 Pfam ABC transporter transmembrane region 84 266 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral1414g00006 564 Gene3D ABC transporter type 1, transmembrane domain 84 317 IPR036640 GO:0005524|GO:0016020
Pral1414g00006 564 ProSitePatterns ABC transporters family signature. 458 472 IPR017871 GO:0005524|GO:0016887
Pral1414g00006 564 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 87 286 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral1414g00006 564 PANTHER ABC TRANSPORTER B FAMILY 84 557 IPR039421 -
Pral1414g00006 564 SMART AAA_5 347 535 IPR003593 GO:0016887
Pral1414g00006 564 Gene3D - 318 560 IPR027417 -
Pral1414g00006 564 SUPERFAMILY ABC transporter transmembrane region 87 304 IPR036640 GO:0005524|GO:0016020
Pral1414g00006 564 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 311 559 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1414g00006 Pral-Chr1414 18394 25820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1414g00006 87 559 Calmodulin-binding Proteins AT2G36910 36.145 2.57e-75 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1414g00006 - - pcin:129294067 843.188