Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1412g00005 ATGGTTCTACCTGTCTATTTGTCCGTCTTCTTCTTCTTGTTCGCTGACCATTCTGCTTCAGCGGATGAGTGCCCGAGTTTCTTTGACTGTGGGAATCTGGTCAAGCTCCGATTCCCTTTGACCACTCCAGAACGCAAAGACTGTGGGATGTTGCCGATTCATGGCTGTGAAGACCCCAACGCTGAGAAAACCGTGCAATTGGGGGCAAAAATGTTTCTGGTGACGAGAGTAGGCATTTCCAATACTGAAGTTTTCATTAGAGACGCAGATTTACAGAAGCGTTGGGTAAATGATGGTTGTGATGCCTTGTGCTGCAATATTACCCTTCCTCCAAGCTCGCCCTTGGGTTCCTTTAATATGTCGCCAAGTATGGTCATGTACAAATGTAATAGTTCGCTCAATTACAGCCTTCCAAAGCAATTCTTGAACTATACAGGATGTGGTCAGAGTAAGAATGAGACCATCTTCTTCAGCACGCAAGATGAAGATGATACTCCATCTTCTTTGGCAGCATGTCCGAGGGTTGAAGTTCCAGTGAATACGATGGCTTTCTCTGCTGATCCATTTACATTCATCGCCTCTGAATTCCCCGTTACAATTCAGCTTTCTAATGACTGTGCTTCATGTGTTTCTGACAAAGGGATATGCAGGCTCAACAGCACTGGAGGATTTTATTGTTCCAAATTCAAAGAACATCGAAATACAAGACGGGCTTGGAAGTTGGGATTGCTAATAGGTGTACCAAGTGCAACTGTTGTGATTATAATTGGTTTGGTTGTTATTGTATTGCGGAACAAACGAAGACACAAGTCTTTGGGCCCACAAAATCAGTCAAGAACCATTGAATCTGATAATACTCACTCAAATGTAATCCTAGAAGGTAGACACATCTACTTTAAGTTCCCTGTCTTCTCCTATGAGGAACTCGAAGAAGCAACAAACAAATTTGATCAATCAAGAGAACTTGGCAGTGGAGGTTTTGGAACTGTTTACTATGGAAAACTTAAAGATGGACGAGAAGTTGCTGTTAAGCGGCTGTTTGAGCGCAACTCATGTGTACAGCAATTCATGAATGAAGTTAAGATTCTAACACGCTTGCGGCACAAAAACCTTGTGTCACTTTATGGCGGCACTTCCCGTACCAGTCGTGAACTGCTCCTAGTCTACGAATATATTCCAAATGGAACTCTTGGTTGTCATCTTCATGGAAATCTGGCAAAACCTGGTTCACTATCGTGGCCCTTGAGGATGAGGATTGCCATAGAGACAGCAAATGCATTGTCCTATCTCCATGCTTCTGGCATCGTTCACCGCGATGTCAAATCCAGCAACCTTCTTCTAGATCACCATTTTTGTGTCAAGGTTGCTGACTTTGGTATTTCCAGATTGTTTCCCATGTTTGTGTCTCATGTCTCCACGGCTCCAGCAGGAAGCCCAGGTTATTTGGACCCCGAATATTACCAATTCTGTGAGCTTACTGAAAAGAGTGATGTTTATAGTTTCGGAGTCGTGCTGATTGAGCTCATATCTTCTAAGCCAGCTATCATTGTTACAAGGACCAAGGATAAGATTAGTTTGGCAAATATGGCAGTTAAGAAGATTCAAAGAAGAGCATTTACTGAGTTTGTAGATCCTTCCCTTTGTTTTGAGTCTGATGACAAGGTTAAGGAGATGATAATCTCAGTGGCAAACTTAGCTTTTCAATGCCTACAAAGGGCTAGAGAGCTAAGACCTTCCATGGATAAAGTAGTGGAGTTTCTCCATAAAATTGAAAATGGTAAGGATGATTATCTAAAGCACCTAGAGTTTCATGGTGCTCGGTTTTCGAACTGGGAGATACATACATCTCTCCCAACCTCACTGCTTTTGGATGGAGCTAGATCAATGAACGACTCAATGCCACAACTCCCTCCCCGTACAGTATGA 1926 0.4289 MVLPVYLSVFFFLFADHSASADECPSFFDCGNLVKLRFPLTTPERKDCGMLPIHGCEDPNAEKTVQLGAKMFLVTRVGISNTEVFIRDADLQKRWVNDGCDALCCNITLPPSSPLGSFNMSPSMVMYKCNSSLNYSLPKQFLNYTGCGQSKNETIFFSTQDEDDTPSSLAACPRVEVPVNTMAFSADPFTFIASEFPVTIQLSNDCASCVSDKGICRLNSTGGFYCSKFKEHRNTRRAWKLGLLIGVPSATVVIIIGLVVIVLRNKRRHKSLGPQNQSRTIESDNTHSNVILEGRHIYFKFPVFSYEELEEATNKFDQSRELGSGGFGTVYYGKLKDGREVAVKRLFERNSCVQQFMNEVKILTRLRHKNLVSLYGGTSRTSRELLLVYEYIPNGTLGCHLHGNLAKPGSLSWPLRMRIAIETANALSYLHASGIVHRDVKSSNLLLDHHFCVKVADFGISRLFPMFVSHVSTAPAGSPGYLDPEYYQFCELTEKSDVYSFGVVLIELISSKPAIIVTRTKDKISLANMAVKKIQRRAFTEFVDPSLCFESDDKVKEMIISVANLAFQCLQRARELRPSMDKVVEFLHKIENGKDDYLKHLEFHGARFSNWEIHTSLPTSLLLDGARSMNDSMPQLPPRTV 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1412g00005 641 Gene3D Phosphorylase Kinase; domain 1 292 391 - -
Pral1412g00005 641 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 594 IPR044652 GO:0004672
Pral1412g00005 641 CDD STKc_IRAK 322 590 - -
Pral1412g00005 641 Pfam Protein tyrosine and serine/threonine kinase 318 587 IPR001245 GO:0004672|GO:0006468
Pral1412g00005 641 SMART serkin_6 316 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1412g00005 641 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Pral1412g00005 641 FunFam Wall-associated receptor kinase-like 20 392 599 - -
Pral1412g00005 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Pral1412g00005 641 Gene3D Transferase(Phosphotransferase) domain 1 392 600 - -
Pral1412g00005 641 SUPERFAMILY Protein kinase-like (PK-like) 298 592 IPR011009 -
Pral1412g00005 641 ProSiteProfiles Protein kinase domain profile. 316 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1412g00005 Pral-Chr1412 39648 43076 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1412g00005 28 592 Receptor kinase-like Gene Family AT1G25390 43.158 6.69e-144 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral1412g00005 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1412g00005 - - pcin:129310591 680.633