Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1404g00003 ATGGCTAAGAGATCAGATTTTGCACAGAAGCTGCTTGATGATTTGCGCCTGAGAAAAGAACGCAATACTGCTTCTCAGTCTCAGAGGACCACCCAATCCAACCAACTTCCTATAGATGCATATGCCTACTCCAAGCAAACATACAGAGGATCCGGGAATGCAAAAGCTATTGAAGCTGTTACTTCCAGAACCGGGGACACGCTGACTAGGCCTAGCAGCAGAAGCCATAGAACATCAAACAATGGAAAAGCTTCGGATCAGATTGTAGTGTACGGGAGAGGTCAGAGCTCAGTGCAATTGAGTGATATATCCCTTGCCTTGGCTTATGCATTTGATAATGGAGGGAAGCTGAGAAGAGATGATTCTTCTCTCACTAGCTCAATGATGGGTTTCCTTCACCAGATTAAACGGGGAACAATGGAGTATAGCAAGATAGGAAGAGGAAGCAATCTGGATAGGCAATTGGCTACAGCAAATCACTTCCCTACTTCCTCTCCTGGGCAGATCAATGAGATATCCAAAGGTGTACAGAAGTTAAACCAGATATTGAGAGCCTGCTCCAATGGTGATCTTAACATGGATAGATACTCGATAGAATTTGCAAAGGAACTATTACGAGGAGCTATGGATTTGGAAGAGTCTCTGAGGATGTTAGTAGACCTGCAGAAAAGTTCAGATTCCATGAAGAACTCACAGAAGAAAAATCGGATTACATTTATAGAGGATGACAATGATGATGACGATGACGATGACAGAACAACCATGACTTCTGAGCAAAGACAACTGGCACCACCAAGATTCTCCTTTGACGAGTCCTCGAGAAATTCTCATAAGCTTCAAGAGGTTGGAAACAGTGCTTTGACGCAGAGGCCACTTGTTCTTACTTACTCTAAAGAACGAAGAAACTTGAGCAATGAAAAGCAAGATGTTAACGTATCGAAATTGCTTCCCCACAGGCAATCAACTAGCTCTATTTCTGATGATAAGAATATCAATGCCCTTTCAGAACAGAAAAATCAGTCAGCTTCAATGAAATCCAACACAGAGAAGGCCAGGATTCCAAATGTGATAGCCAAGTTAATGGGGCTGGATAATATTCCGGAGAAAGTGGAATCAGGAAATCCCTCTCAGAAGGATTCAGGTTCTCCACACAAAATAGAAAGGACGACATTCAAGCATTCTGCCAAGAAAAATGAATTGAAGAGCCGAAAAACAGAGAATTTGGTGCCTCCAAAACAGCAAAAAGGGATAGAACCTGTCATTGTGCCTAAAACACAGGAAAAGGAGCTGCTGTATGGTGCAGATGAAAACTTGATCATCCAAAAAGCAAGCTCTGAGGTGGCAGTGAAAAACGGGAAAATGATATGGAGGGAGTTGCATGAAATAAAAGCATCCAACGGAGCCATCAAAGTAGAGAAGCAGCATAACAATTCATATAAAATGACCCTGAATAGAGAAAGTGGAAAGGATGTTCATGCCAATGGAAGAAAACAGGTTCAGGCAACCAACAGAGAACAGAAAGTGGCATTAAAGGGAAGAACCAATGATCTGCTTCTAAATAACATGCTAGCCCAGCTGGAGCGGGGTCATGAAAGATCAGAAGTTGACTCTTCATTGCAGGAAGAAAAAGAAGACATTGGTATTTTTCTTCAACCGGTGAAGAAAAACATGAACAAGAAGGAAGCAACCAATCAAAAGAAGTCTCAGAATCACTCTGGAATTCAAAAGCCTTATGCGCTCTTGAAATATGGGCCACAAGAAGAACAGCACCACAGAGAAAAGCAGCTCCAGCACCGTGAAAAACATATGTTAGAGCTAAGAATACAAAAAGGGAGCGAAGCAGCTTTGAAAAATTCGTCAAAACTTTCACATGACCTGGCCAATTCACTGAAGAAGCAAACACTCACAAGCCAAGCCACACCATTTAAGCACACTTCTGCAGAAAATGTTGACGTTATGAAACAAGAAGTTTTCCTAGTTCACGACCATAATGATCTAAACCAGGATGAAGCATCCAATGAGTTCAATGTGAAAGTGGAACAAGTGAACAACAGGAAACCAGGTCAAATTACCTCTCCAAGAAATCAGCAATCTGAACCATTTACAGGGAAGCATGGCTTCACAACAATGATGGATCAAACAAGTGTTCATAAACTAGCCAATGAGAAGGTGAAGAATATAAGAAAGAAAAAAGCTGACTCAACTGAAAAGATTGAGGAGGTGCTGACTAGAAGAAATGGAACAATGGTTCATAGCACTGCAAAAGTGAAACAGGGGAGTCCCAATTTAAAAGAAATGAGACGAACACCATCTGAATCTGATAAGTTCAATTTATCAAAGGAAGCTAAGCAAGAAAGGGCCAGCGTGTTGAAAGAAGCAGACGCTCGCATCATCAGCTCCAATGACTCAGTATCTATCATTGAACCATTGAATGTGAGACAACAACCACATCCAAAAGCAGAACTCTCTCCTACATTGTACAATTCTTATGGTGAGAAAGTTCAAGGCGAACAAGAATTATTAGATTTGGTTCCCAATAATTCGTATCGAAATGTCAAGTCGGTGGACGCTAATGACAAGCAGCATCTAGCTACTCCTTTGGCAGTAGATGAAAAATTTGAGTCTTGTGAAATTGCACCAACTACGATAAACGGAGTTCATGAAGAAAGTATTGACATAAACTACCATTCACAAAAGCAAGTCCAGAGAATTTCTAAAAAAGGAATGCAAGAGCCACTCAGTGAAAGTGAAAACTGCCTCAAATGGATCTTAGTCACGAGTCAACCGTTCCTCAACACAGCAGAAGCACTTTTCAAGCTAAACATTCCATTTAGCATTCTTCGAGGCTGTGGTGTCGTTGACAATCAAGATGAAGGAGGCAGCAAGCTGATATTAGACTGCAGCTATGAAGTGACGAAACGCAAGGGGATACGTCAAGAACTCAAAGTCCATCCTTGCTTAAAGGCATCAATCAGTCCCATCAAAATTGGATCATTAGATGATTTGGTTAGGCAGTTGAATGAAGACATGGAAAAGCTAAAGTTTTATGGCAGGAACAGAACTTCCCCTGTTCATGTTGAGGACTATCTTCCTACAATGCTTGAAAATGATGTGTACAACAAGTATCCAGACATGAACTGTATGTGGGACTTGGGTTGGAACCAGGAGACATTTGCATTCCTCGAAAAATATGATGTCACAAGGGTTGTGGAAAAGCATATCCTTAATGGACTTTTGGATGAGATTACACGGGAACTTTCGAATGTTCGAGGGGGACCACACTAA 3285 0.414 MAKRSDFAQKLLDDLRLRKERNTASQSQRTTQSNQLPIDAYAYSKQTYRGSGNAKAIEAVTSRTGDTLTRPSSRSHRTSNNGKASDQIVVYGRGQSSVQLSDISLALAYAFDNGGKLRRDDSSLTSSMMGFLHQIKRGTMEYSKIGRGSNLDRQLATANHFPTSSPGQINEISKGVQKLNQILRACSNGDLNMDRYSIEFAKELLRGAMDLEESLRMLVDLQKSSDSMKNSQKKNRITFIEDDNDDDDDDDRTTMTSEQRQLAPPRFSFDESSRNSHKLQEVGNSALTQRPLVLTYSKERRNLSNEKQDVNVSKLLPHRQSTSSISDDKNINALSEQKNQSASMKSNTEKARIPNVIAKLMGLDNIPEKVESGNPSQKDSGSPHKIERTTFKHSAKKNELKSRKTENLVPPKQQKGIEPVIVPKTQEKELLYGADENLIIQKASSEVAVKNGKMIWRELHEIKASNGAIKVEKQHNNSYKMTLNRESGKDVHANGRKQVQATNREQKVALKGRTNDLLLNNMLAQLERGHERSEVDSSLQEEKEDIGIFLQPVKKNMNKKEATNQKKSQNHSGIQKPYALLKYGPQEEQHHREKQLQHREKHMLELRIQKGSEAALKNSSKLSHDLANSLKKQTLTSQATPFKHTSAENVDVMKQEVFLVHDHNDLNQDEASNEFNVKVEQVNNRKPGQITSPRNQQSEPFTGKHGFTTMMDQTSVHKLANEKVKNIRKKKADSTEKIEEVLTRRNGTMVHSTAKVKQGSPNLKEMRRTPSESDKFNLSKEAKQERASVLKEADARIISSNDSVSIIEPLNVRQQPHPKAELSPTLYNSYGEKVQGEQELLDLVPNNSYRNVKSVDANDKQHLATPLAVDEKFESCEIAPTTINGVHEESIDINYHSQKQVQRISKKGMQEPLSESENCLKWILVTSQPFLNTAEALFKLNIPFSILRGCGVVDNQDEGGSKLILDCSYEVTKRKGIRQELKVHPCLKASISPIKIGSLDDLVRQLNEDMEKLKFYGRNRTSPVHVEDYLPTMLENDVYNKYPDMNCMWDLGWNQETFAFLEKYDVTRVVEKHILNGLLDEITRELSNVRGGPH 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1404g00003 1094 MobiDBLite consensus disorder prediction 297 348 - -
Pral1404g00003 1094 MobiDBLite consensus disorder prediction 367 409 - -
Pral1404g00003 1094 MobiDBLite consensus disorder prediction 308 348 - -
Pral1404g00003 1094 MobiDBLite consensus disorder prediction 18 38 - -
Pral1404g00003 1094 MobiDBLite consensus disorder prediction 60 86 - -
Pral1404g00003 1094 Pfam DUF761-associated sequence motif 342 369 IPR032795 -
Pral1404g00003 1094 MobiDBLite consensus disorder prediction 381 408 - -
Pral1404g00003 1094 Coils Coil 724 744 - -
Pral1404g00003 1094 MobiDBLite consensus disorder prediction 24 38 - -
Pral1404g00003 1094 MobiDBLite consensus disorder prediction 227 241 - -
Pral1404g00003 1094 PANTHER OS01G0228800 PROTEIN-RELATED 8 1086 - -
Pral1404g00003 1094 MobiDBLite consensus disorder prediction 224 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1404g00003 Pral-Chr1404 37901 43749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1404g00003 1 368 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 34.595 4.89e-45 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1404g00003 - - pcin:129300405 1539.63