Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1402g00005 ATGAAGCAGCCAGAAGGCTACCTTACTAGAGATGAAAAATATTATGAGGATGAGGAGAACAAGGAAAATGAGCATGGTGGCGATAAAGGAGAAGGCGATGAAGATGCTGAAGTTGGCGATGATCTTCAAGATGATGCAGAGTACTTGTTAGGAGACGAAGGTCCAACTTCTACCGGGGGGGAACTTGAAAAAGGTCTTCCAGCAGAAGATTCGGATAAGGGTAATGAGTCTTCTAGACATTTCAGCCATGGATCTTATCTGGTCCAAGGAAAGATGGACCATGGAAGGGAGGATTATATTTTTGCTGAACACAGGAACATCAATGGCTGCGACTTAGGACTATATGCAATTTTTGATGGCCACGCTGGTCGAGCTGTTGCAAAATACTTGCAAGGCCATCTATTTGAAAGAATATTGAGCGAGCCTGACTTCTGGAAGAATCCAGTACGTGTCCTTAAGAGATCATGCAAGGCCATGGATGAAGAGATCCTAGAAAAGATAGCAGATTCACGAGGGGGATCAACAGCTGTTGTAGGAATACTTGTTAATGGAGTGAAGTTACTGGTAGCCAACGTCGGCGATTCTCGAGCAATATTATGCAGAAACGGTGTGGCAAAACAAATTACAGAGGATCATGAGCCACTGAGGGAGAAAGATCTCGTTGAGAGCAAAGGAGGTTTTGTGTCCAAGGCACCCGGACGTGTTCCAAGAGTGGATGGTGTATTAGCAATGAGCAGGGCATTTGGGGATGGAAGGTTGAAGGAACACATTACTGCAGAACCAGACGTGATGGTTCAAAACATCACTGAGGACACTGAGTTCGTCATTTTGGCTAGTGACGGCCTCTGGAAGGTGATGACGAACGAAGAAGCTTGTGAGTGCGTGAAGGATATGGATGATGCAAAAAAAGCAGCCAAGAAGCTGGTTAAAGAAGCATTGGCTCAAGGAAGCTATGATGATATTTCATGCATTGTTGTAATGTTCCAGGCTAATTGA 996 0.4478 MKQPEGYLTRDEKYYEDEENKENEHGGDKGEGDEDAEVGDDLQDDAEYLLGDEGPTSTGGELEKGLPAEDSDKGNESSRHFSHGSYLVQGKMDHGREDYIFAEHRNINGCDLGLYAIFDGHAGRAVAKYLQGHLFERILSEPDFWKNPVRVLKRSCKAMDEEILEKIADSRGGSTAVVGILVNGVKLLVANVGDSRAILCRNGVAKQITEDHEPLREKDLVESKGGFVSKAPGRVPRVDGVLAMSRAFGDGRLKEHITAEPDVMVQNITEDTEFVILASDGLWKVMTNEEACECVKDMDDAKKAAKKLVKEALAQGSYDDISCIVVMFQAN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1402g00005 331 SMART PP2C_4 69 326 IPR001932 -
Pral1402g00005 331 SUPERFAMILY PP2C-like 77 329 IPR036457 -
Pral1402g00005 331 MobiDBLite consensus disorder prediction 65 79 - -
Pral1402g00005 331 MobiDBLite consensus disorder prediction 1 86 - -
Pral1402g00005 331 MobiDBLite consensus disorder prediction 1 32 - -
Pral1402g00005 331 Coils Coil 295 315 - -
Pral1402g00005 331 SMART PP2C_SIG_2 87 328 IPR001932 -
Pral1402g00005 331 Gene3D - 62 331 IPR036457 -
Pral1402g00005 331 MobiDBLite consensus disorder prediction 33 48 - -
Pral1402g00005 331 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169
Pral1402g00005 331 ProSiteProfiles PPM-type phosphatase domain profile. 82 328 IPR001932 -
Pral1402g00005 331 PANTHER PROTEIN PHOSPHATASE 61 327 IPR015655 GO:0004722|GO:0006470
Pral1402g00005 331 FunFam Probable protein phosphatase 2C 39 74 329 - -
Pral1402g00005 331 Pfam Protein phosphatase 2C 113 321 IPR001932 -
Pral1402g00005 331 CDD PP2Cc 81 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1402g00005 Pral-Chr1402 22382 24356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1402g00005 65 329 PP2C-type Phosphatase Gene Family AT3G15260 53.160 1.97e-96 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1402g00005 - - gmx:100814772 417.927