Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1400g00008 ATGCTTCAAGACACAGGAAACTTGGTTTTAACCAAAAATGAAGCAAAACCAAGGGTTATATGGCAGAGTTTTGACTATCCTAGCGACACAGTGCTGCCGTTCATGAAAATTGGGGTGAACCGGAAAACTGGTTTTCATTGGTCCCTTACGTCGTGGAAATCTCCCGACGACCCAGGATTCGGGAACATGACTATGACGATCGACCCAACTGGTTATCCTCAAATGTTCGTTTATAAAAATGGAGCTCCATTTTGGCGGGTTGGGTCTTGGACAGGTGAAAGATGGAGCGGCGTGCCACATATGACTCTCAACTTTATCTTCAACATCACCCACGTTGACAATGCCAATGAAGTTAGCACCGTGACCCAAATCATGGACCCTTCAATCTTCTTAAAATTTGTGCTTCACAACACTGGTCATTTGACACGAACCATTTGGCAAGTTAACGAGAATAGGTGGCTCCAAATATGGGATGATCCAAGAGGGCAATGTGACTACTATCATCAATGTGGGTCAAATAGTAAGTGTGACCCGTATAATGAGAAAAAGTTCGAGTGTGTGTGCTTGCCTGGATCCGAACCCACAAATCCGCAAGAGTGGAATATGAGAAATTGGTCGAATGGGTGTGAGAGAAAGAAGAATGCATCCGCGTGTCACAGTGGGGAGGGTTTTGTAAAAGTGGCACGTGTCAAGGTGCCAGATACATCAAAGGCACGTATTGATACGTGGGAGAGTATGAGCTTGAAAGGGTGCGAGGAGAAGTGCCTAAGGGATTGTTCATGTGCAGCATATACAATTGCGGATGACATCAAACAGACCGGGTGCTTGACGTGGCATTCTGATATGGAAGACATCAGAACATTCGAAAATGCAGGGCAGGATTTGTACGTGCGTGTGGATGCAGATGAATTGGCTAAATATGAAAGGAAGCATTATGGTTCCCTTGGAAAGAAGGGGATGATGACCCTCATAGTCGTTTCTATTTGCCTGATAACGTTCCTGGTGATCTCTTTCTTGTGTTGGTTTGTAATGAAGAGCAAGAATCAAGCAAAAAGAATGCACAAAGAATATTTTTTTAATGGAGAAGACAATTCTGGCTTAACTCTGTTTGATCTAAAGGACATAGTCGAGGCAACAAACAATTTCTCAGACGCTAACATGCTTGGAAAAGGTGGTTTTGGTTCCGTATATAAGGGTCTACTTAAAGATGGAATGGAAATAGCAGTTAAGAGGCTATCATATTATTCTGGACAAGGCATTGAAGAATTCAGGAATGAGGTTACTTCAATTGCAAAGCTCCAACATAGAAATCTTGTAAGGATGTTAGGTTGTTGCGTAGATGAAGAAGAGAAGATATTGATATATGAATATCTGCCAAATAAAAGCTTGGACTCTTTCATATTTGATCAAGTGAGAAAATTACAATTAGATTGGAGGAAAAGATTTGACATCATTTGTGGAGTTTCAAGAGGAATTTTATACCTTCATCAAGATTCAAGATTAAGAATAATTCATAGAGACTTAAAGGCCAGCAATGTCTTGTTAGATCCTACAATGAATCCAAAAATCGCAGATTTTGGTACGGCAAGAATATTTGGTGGAGACCAAATTGAAGCAAACACAAACCGTATTGTTGGAACTTATGGTTATATGTCACCTGAATATGCAATGGAAGGAATTTTTTCAATAAAGTCAGATACATATAGCTTTGGAGTTTTACTTTTGGAGATTGTTACAAGCAGAAAGAATAGTGGTCATTATGATGATGTTAGTTCTACTTTGGTTGGACATATTTGGAACCTATGGAGAGAAAACAGAGCTATGGAGATTGTTGATCCATCATTAATAGGTGAAACATGCCCTGAACATGAAGTTCTCAAATGCATCCATATTGGGCTTTTATGTGTGCAAGAATATGCAACAGATAGGCCTACTATGTCAGAAATTGTTTCTATGTTGGATAATGACTCGACTTTTCTCCCTCCAAAGCAACCAGCATTTCTTTTCAAGAAAACTAATTATGATGATTCAAATTCATCAATCAGTGAAGGAGTTAATTCAATTAATGAGATGAGTACTACCGTGATTGGAGCTCGATGA 2100 0.3981 MLQDTGNLVLTKNEAKPRVIWQSFDYPSDTVLPFMKIGVNRKTGFHWSLTSWKSPDDPGFGNMTMTIDPTGYPQMFVYKNGAPFWRVGSWTGERWSGVPHMTLNFIFNITHVDNANEVSTVTQIMDPSIFLKFVLHNTGHLTRTIWQVNENRWLQIWDDPRGQCDYYHQCGSNSKCDPYNEKKFECVCLPGSEPTNPQEWNMRNWSNGCERKKNASACHSGEGFVKVARVKVPDTSKARIDTWESMSLKGCEEKCLRDCSCAAYTIADDIKQTGCLTWHSDMEDIRTFENAGQDLYVRVDADELAKYERKHYGSLGKKGMMTLIVVSICLITFLVISFLCWFVMKSKNQAKRMHKEYFFNGEDNSGLTLFDLKDIVEATNNFSDANMLGKGGFGSVYKGLLKDGMEIAVKRLSYYSGQGIEEFRNEVTSIAKLQHRNLVRMLGCCVDEEEKILIYEYLPNKSLDSFIFDQVRKLQLDWRKRFDIICGVSRGILYLHQDSRLRIIHRDLKASNVLLDPTMNPKIADFGTARIFGGDQIEANTNRIVGTYGYMSPEYAMEGIFSIKSDTYSFGVLLLEIVTSRKNSGHYDDVSSTLVGHIWNLWRENRAMEIVDPSLIGETCPEHEVLKCIHIGLLCVQEYATDRPTMSEIVSMLDNDSTFLPPKQPAFLFKKTNYDDSNSSISEGVNSINEMSTTVIGAR 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1400g00008 699 Pfam Protein tyrosine and serine/threonine kinase 386 653 IPR001245 GO:0004672|GO:0006468
Pral1400g00008 699 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 458 661 - -
Pral1400g00008 699 CDD PAN_AP_plant 220 299 - -
Pral1400g00008 699 CDD STKc_IRAK 388 655 - -
Pral1400g00008 699 PIRSF SRK 1 699 IPR024171 GO:0004674
Pral1400g00008 699 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 345 457 - -
Pral1400g00008 699 Pfam PAN-like domain 218 285 IPR003609 -
Pral1400g00008 699 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 677 - -
Pral1400g00008 699 SMART ntp_6 219 299 IPR003609 -
Pral1400g00008 699 Pfam S-locus glycoprotein domain 85 195 IPR000858 GO:0048544
Pral1400g00008 699 Gene3D Transferase(Phosphotransferase) domain 1 458 660 - -
Pral1400g00008 699 SMART serkin_6 382 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1400g00008 699 Gene3D Phosphorylase Kinase; domain 1 342 457 - -
Pral1400g00008 699 SUPERFAMILY Protein kinase-like (PK-like) 364 653 IPR011009 -
Pral1400g00008 699 Pfam D-mannose binding lectin 2 53 IPR001480 -
Pral1400g00008 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Pral1400g00008 699 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 58 IPR036426 -
Pral1400g00008 699 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Pral1400g00008 699 ProSiteProfiles PAN/Apple domain profile. 218 300 IPR003609 -
Pral1400g00008 699 ProSiteProfiles Protein kinase domain profile. 382 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1400g00008 Pral-Chr1400 143373 148793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1400g00008 370 694 Receptor kinase-like Gene Family AT4G11530 57.357 1.70e-126 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1400g00008 PK_Tyr_Ser-Thr 8.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1400g00008 - - pcin:129284814 1157.9