Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1397g00015 ATGACAAGGCGAGCAAATTTGATAGATTACCAATGGACTTACGATGTCTTCCTCAATTTTAGAGGCGAAGATACTCGTTATGGTTTCACAGGAACTTTATATAAAGAACTCAATCGAAAGGGGGTTCGCACCTTCTTTGATGACAAGGAAATAAGAATAGGAGATGAAATTACACCAACGCTTCTCAAAGCAATTCAGGAATCTAGAATGGCCATTATTGTATTTTCTAAGCAGTATGCTTCCTCAACATTTTGCCTAAATGAACTAGTCCAAATCCATCAATGTATCAAGGAAAATGGTCAACTAGTTTGGCCAATTTTTTATGATGTGGAGCCTTCTGAAGTACGACATCAAAGAAGGAAATATGGAGAAGCACTAGTTACACATGAACAAAACTCAAAGGCTGATGAAGAAAAGATGAAAAGTTGGAAGCACGCACTACGTGAAGTAGCTAACCTTAAAGGCTTATCATATGATCCAAGGAAAGATTATGAACATGTACTAGTTGAAGATGTTGTGAACCAGATCTTTAGGATAATCAGCAGGGTCCCCCTTGATGTTGCCGAATATCCAGTTGGTTTGAATTTTCGTGTGGAAAAAATAAATTCTCTATTGAAACTTGGGTCAAATGATGAGGTCATCATGATAGGAATTTATGGAACCGGTGGAATGGGTAAAACAACAATAGCACGTGCTGTGTGTAATGCCATTGCTGATAATTTTGATTACTTGTGCTTTCTCGATGATATCGGAGGAGGATCTAGAAAACATGGCCTAGAACAAGAGCAAGCCAGAATGCTTTCAAAAATTTTAGGGGAGAAAATAGAAATTGAAGAGATTAATCAAGGAGTTGAGCTAATAAAACGAACACTCAAAGATAAGAAAGTTCTTTTGATTCTTGATAATGTGGATGAACAAAAGCAATTAAAAAAGTTAGCTGGGACATGTGATTGGTTTGGTTTGGGGAGTAGGATCATTATAACAACAAGGGATTTACAATTACTCAAGAGTCATGGGGTTGGAAGAATATATGAGATGGAGGGATTAAATTATGAAGAATCTCTTGAATTGTTAAGTTGGAAGGCCTTTAAAAGTATGCAAGTTGATGATCCAAGATATCGGGAAGTTGTGAATCAAGTGATAAGTTATGTCAACGGTCTTCCCTTAGCCCTTGAATTAATAGGCGCTGACTTGTATGGTAAGAAGTTAAGGGAGTGGGAATCTATGTTAGATGGATGTAAAAGAATCCCTCATGATAAGATTCAGCAAATATTAAGAGTAAGCTACGACGGCTTACAACAACTTGAAAAATAA 1314 0.3683 MTRRANLIDYQWTYDVFLNFRGEDTRYGFTGTLYKELNRKGVRTFFDDKEIRIGDEITPTLLKAIQESRMAIIVFSKQYASSTFCLNELVQIHQCIKENGQLVWPIFYDVEPSEVRHQRRKYGEALVTHEQNSKADEEKMKSWKHALREVANLKGLSYDPRKDYEHVLVEDVVNQIFRIISRVPLDVAEYPVGLNFRVEKINSLLKLGSNDEVIMIGIYGTGGMGKTTIARAVCNAIADNFDYLCFLDDIGGGSRKHGLEQEQARMLSKILGEKIEIEEINQGVELIKRTLKDKKVLLILDNVDEQKQLKKLAGTCDWFGLGSRIIITTRDLQLLKSHGVGRIYEMEGLNYEESLELLSWKAFKSMQVDDPRYREVVNQVISYVNGLPLALELIGADLYGKKLREWESMLDGCKRIPHDKIQQILRVSYDGLQQLEK 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1397g00015 437 Pfam NB-ARC domain 198 419 IPR002182 GO:0043531
Pral1397g00015 437 SMART till_3 13 153 IPR000157 GO:0007165
Pral1397g00015 437 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 182 - -
Pral1397g00015 437 Gene3D - 348 436 IPR042197 -
Pral1397g00015 437 PRINTS Disease resistance protein signature 384 398 - -
Pral1397g00015 437 PRINTS Disease resistance protein signature 215 230 - -
Pral1397g00015 437 PRINTS Disease resistance protein signature 290 304 - -
Pral1397g00015 437 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 155 IPR035897 -
Pral1397g00015 437 Gene3D - 10 176 IPR035897 -
Pral1397g00015 437 ProSiteProfiles TIR domain profile. 12 180 IPR000157 GO:0007165
Pral1397g00015 437 Pfam TIR domain 14 177 IPR000157 GO:0007165
Pral1397g00015 437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 437 IPR027417 -
Pral1397g00015 437 Gene3D - 177 340 IPR027417 -
Pral1397g00015 437 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 434 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1397g00015 Pral-Chr1397 241466 242945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1397g00015 14 437 WRKY Transcription Factor Family AT4G12020 25.935 5.21e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1397g00015 - - pcin:129316478 513.842