Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1395g00003 ATGGCTGTAGAATTACTAAATCAAAGCCTATGCCTTTCTATATTATGGTGCCTCATCCTCACCATGATTGTGTTTAAGCTCATAATTAGAAGAAGCAACAATAAGCTGAATCTGCCTCCATGCCCTCCAAAATTACCCATTATTGGCAATCTTCATCAGATAGGAGGGCTCTCTCACCGTTCTCTGACATCTTTCTCACAAAAGTATGGCCCTCTTATGTTGCTCCAATTTGGTCAGATTCCAACTCTGGTGGTTTCTTCTGCAAACCTTGTGAGAGAAATGGTCACAATCAACGACCTGGCTTTCTCTTATCGTCCCTCAATGACAGTTCCAGAAATCTATTTCTATGGAGGCAAGGACGTGAGTTTGGGACCCTACGGCGAAGATTGGAGATACAAAAGGAAAATCTCTGTTATTGAATTCCTAAGCTTGAAAAAGGTGAGATCTTTTCAATTCATCAGAGAAGAGGAAGTTTCAAACATGGTTAACAAGATTCGTGAAGCTTGCATGAAGAATAATAATGTAGCAGTGAATCTGGTTAGGATGGTTAGTGCAACCACATGGAACATAAATTTTAGATGTGTTTTTGGCAAGCAGTATGAAACACTAGATGATAAAAGTAACGGTTTTAACGAGATAGTCATGAAAATATTGACTCATTTCAGGGAGTTCAGTTTTGGGGATTACTTCCCGTCATTGTGGTGGATGGATTTTGTTACAGGGCTTGTTCCCAAAGTGAAGGCCAATTTCAGAGAAATGGACGCTTTCATCAACCACGAGATTGAACAACGTAAGAGTGGGAAAAAGAATACTGAGAATAAGGACTTCATAGATGTTTTGGTTCAACTTCAACAAGACGATGATATGCCTGACGTTGGACTCTCCCTAGCTAGCATCAAGACACTGATAACAGGTATGATTATTGGGGGATTGGAAGCTAATGCAACTATGGTAGAATGGGCTATGGCAGAATTGATGAGACATCCGGAGAAAATGAAGAAAGCACAAGAAGAGGTACGAAGAATTGCAGGGAAGAACAATAAATCAAGAAAAATAATAGAAGAAAACGATGTGAATCAAATGAGCTACTTGAAATGTGTGGTGAAGGAAGCTACGAGACTTCATCCACCTGGTCCTCTTCTTTTCCCAAGGCAAACTAATAGTAGCACTGTGAAACTAGGAGGCTACGATATTCCCCCAAAAACAAGTGTAATTATCAACGCATGGGCAATTCAGAGAGATCCTAATCTCTGGGAAAAACCAGAAGAATTCATACCAGAAAGATTTGAGAATAATGATGTTGATTTCAAAAGCCAAGACTTTGGATTAATACCATTTGGTTTTGGAAGAAGAATTTGTCCTGGGATCTTATTTTCAGTGGCAACGATTGAGTATACACTTGTTAATCTCTTGTATTGGTTTGATTGGAAGCTGCCTGCTCATAATAATGAAAACGGAAAGGACGACATAGATATGAATGAGACAGACGGCCTACTTTCCTCCATGATGCTTTCTCTTCATCTTCACCCAATTCCATATGTACCCCTTTTGCCCTAA 1557 0.3963 MAVELLNQSLCLSILWCLILTMIVFKLIIRRSNNKLNLPPCPPKLPIIGNLHQIGGLSHRSLTSFSQKYGPLMLLQFGQIPTLVVSSANLVREMVTINDLAFSYRPSMTVPEIYFYGGKDVSLGPYGEDWRYKRKISVIEFLSLKKVRSFQFIREEEVSNMVNKIREACMKNNNVAVNLVRMVSATTWNINFRCVFGKQYETLDDKSNGFNEIVMKILTHFREFSFGDYFPSLWWMDFVTGLVPKVKANFREMDAFINHEIEQRKSGKKNTENKDFIDVLVQLQQDDDMPDVGLSLASIKTLITGMIIGGLEANATMVEWAMAELMRHPEKMKKAQEEVRRIAGKNNKSRKIIEENDVNQMSYLKCVVKEATRLHPPGPLLFPRQTNSSTVKLGGYDIPPKTSVIINAWAIQRDPNLWEKPEEFIPERFENNDVDFKSQDFGLIPFGFGRRICPGILFSVATIEYTLVNLLYWFDWKLPAHNNENGKDDIDMNETDGLLSSMMLSLHLHPIPYVPLLP 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1395g00003 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Pral1395g00003 518 SUPERFAMILY Cytochrome P450 39 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 CDD CYP71-like 68 498 - -
Pral1395g00003 518 Gene3D Cytochrome P450 23 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1395g00003 518 PANTHER CYTOCHROME P450 71B11-RELATED 22 511 - -
Pral1395g00003 518 FunFam Cytochrome P450 83B1 26 509 - -
Pral1395g00003 518 Pfam Cytochrome P450 39 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1395g00003 Pral-Chr1395 18744 20748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1395g00003 19 516 Cytochrome P450 AT3G26280 40.198 6.63e-127 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1395g00003 K20617 - cave:132175279 510.375