Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1386g00001 ATGGAGTCCATTTGCCCAATAGACGCGCGGTGTGCCAATGAAATTGCAGCACTTCTCAGTCCTCCGTCACCTCTTGAAGTTCAGGAATATTATCATAAGCTTTTATCTACAAGGAAATGCAGTAGTATCATAGTCAAACAGGATGGAAACTTTGGAAAGGGTGTGTATGCTGCCGTGGACTTCGATGAAGGGGAGCTTGTTCTGAAAGATCAAATGCTAGTTGGGGTTCAACACTCTTCCAACAAGATTGACTGTTTTGTCTGTAGCTCCTGCTTTCGTTTTATTGGTTCTATAGAACTTCAAATTGGAAGGAGGCTTTACTTACAAGAATTAGGGGCTGAGAGTCATGGTTGCGATATGGGTGACTCCTCAAACACATCAAAACACAAAAATGATAAAGATTCATCTGATGGAGAGGACAATTCATATAAAAAAAAGGAGGATGGCGCTGGAGAATGTAGTTTTGGCAGTTCTGAAGCTAAAATTCATCTCCCTGAAGGTGTTGTTCAATCATTAATGAACGGCCATATGGTGCTGCCTTACTCTAAGGAGTTCTCCTTGCCACCAGCTGTTCCATGTCCAGGTGGATGTGGAGAGTCATTCTACTGCAGTACATCATGTGCAGAGGCTGATTGGGAATCCTCTCATTCTTTGATTTGTACTGGTGAGAGGTCTGATGCAGCACGGAGGGAGGCACTTCTAAAATTCATCAAACATGCTAATGAAACAAATGATATATTCCTCCTTGCCGCAAAGGCTATTTCTTCCACCATATCAAGGTACCACAAGCTAAAAGAGAGATATCTTTTAGGGAAAGGTAAATATGATAAGTCACATCTTTCAAACCGTTGTGATCTCACTATTCTTTTGGAGGCTTGGAGACCTATAGCAGTGGGACACAAGAGAAGGTGGTGGGACTGCATCGCATTGCCAGATGATATTAATTCTTCTGATGAAGTTGCTTTCAGGATGCAGATAAGAGACTTGGCATTTGAGTCACTCCAACTTCTAAAGACAACCATATTTGACAGCGAGTGTGAACCATTATTCTCCCTGGAAATATATGGGCACATCATTGGCATGTTTGAGCAAAATAATCTTGATTTGGTGGTAGCTTCTCCTGTGGAAGATTACTTTTTATACATTGATGATCTAAGATATCCTGAAAAGGAAAAAGCTGAGGAAATCACGCAACCAATCCTGGATGCTCTCGGTGAAGACTATTCCATTTGTTGCCAGGGAACTGCATTTTTTCCATTGCAAAGCTGCATGAACCATTCCTGCTGTCCTAATGCAAAGGCGTTCAAAAGAGAGGAGGATAGAGATGGTCAAGCAACGATAATTGCACTGAGGTCCATTCATAAAGGAGAAGAGATGACAATCTCATATGTCGATGAGGATCTTCCATTCGAAGAGAGACAAGCATCCCTTGCAGATTATGGTTTCAGATGTAGGTGCCCAAAGTGCGTTGAAGAACAACCATAG 1485 0.4202 MESICPIDARCANEIAALLSPPSPLEVQEYYHKLLSTRKCSSIIVKQDGNFGKGVYAAVDFDEGELVLKDQMLVGVQHSSNKIDCFVCSSCFRFIGSIELQIGRRLYLQELGAESHGCDMGDSSNTSKHKNDKDSSDGEDNSYKKKEDGAGECSFGSSEAKIHLPEGVVQSLMNGHMVLPYSKEFSLPPAVPCPGGCGESFYCSTSCAEADWESSHSLICTGERSDAARREALLKFIKHANETNDIFLLAAKAISSTISRYHKLKERYLLGKGKYDKSHLSNRCDLTILLEAWRPIAVGHKRRWWDCIALPDDINSSDEVAFRMQIRDLAFESLQLLKTTIFDSECEPLFSLEIYGHIIGMFEQNNLDLVVASPVEDYFLYIDDLRYPEKEKAEEITQPILDALGEDYSICCQGTAFFPLQSCMNHSCCPNAKAFKREEDRDGQATIIALRSIHKGEEMTISYVDEDLPFEERQASLADYGFRCRCPKCVEEQP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1386g00001 494 CDD SET_SMYD 403 489 - -
Pral1386g00001 494 SUPERFAMILY SET domain 38 489 IPR046341 -
Pral1386g00001 494 Pfam MYND finger 192 220 IPR002893 -
Pral1386g00001 494 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 13 493 IPR044237 GO:0008168
Pral1386g00001 494 MobiDBLite consensus disorder prediction 123 152 - -
Pral1386g00001 494 MobiDBLite consensus disorder prediction 118 155 - -
Pral1386g00001 494 ProSiteProfiles SET domain profile. 41 464 IPR001214 GO:0005515
Pral1386g00001 494 Gene3D SET domain 386 493 IPR046341 -
Pral1386g00001 494 SUPERFAMILY HIT/MYND zinc finger-like 195 221 - -
Pral1386g00001 494 Gene3D - 152 222 - -
Pral1386g00001 494 Pfam SET domain 52 463 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1386g00001 Pral-Chr1386 1800 8590 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral1386g00001 SET 3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1386g00001 - - pcin:129300428 914.45