Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1384g00006 ATGGAAGAAAAAGGGTTGGTGGTGTTGATGGTGATGCTAAGTTTGTTTGCTTCGAGTTTTAGCGTTTCTTCTTCACCTCTCAACAATGAAGGCATGATGCATGATGATGGTTTGGCTCTGTTAAAGTTGAAGAACAGAGTGGTAAGAGACCCATTTGGAGCTTTGTCCAATTGGAATGGCGAAGGCGTACATACCGATCCCTGTTCATGGTTTGGAGTAGAATGCTCCGTTCACGGCAAAGTTGTTTCCTTGAATTTGAAGGACCTTTGTCTTGAAGGAACACTAGCCCCTGAAATTGGGAAGCTGACTCACATAAAATCTATCATTTTGCGCAACAATTCTCTTTTTGGAGAGATTCCTAAAGAGATATCACAACTGGAGGAGCTGGAAGTCCTTGACTTGGCACATAACAACTTTAAAGGATCGTTTCCATCTGACCCGGGCAGCAATCCATCCCTCACTACCCTGCCCATAGACCACCATGGGGATTTGCATTACAAGAGGAAACTTCTTCATAGATCAAAAGCAAGGAGACTAAGAGATGATAACAAAGAGTCGATTTCACCATCATCCTCACCTTTCCCCTCTTCATTACCACCAGATTATGAGCCTTTCTCGCCATCAGAATCACCCTCAAATCCACCATCTGCATTAACCCCATCACCATATATTCTCCCACCTTTAAGGTCCCCTGAAGTTTCCCCTTCACCTTCTCCGTCCTCTATTTTTCTCACTCCTTCAATTTCACCAATGGTGACACCAACCCCAGGAATATCACTACCAGCAAATCCACCTACTGTTGTATCCTCTCCTTCACAGTCCAATTGGATTTCAGAGCCTTCCCCTGCTTCATTTTGGAACCAAGGGAGCACAAAAAGTTTCAAGCCCCAGAAATCTCTGATCATTTGGTCAACAGCTGGGGGCGTATCCTTGCTGGTTGTCGTGTCAGCGATTGTTTTTACTTGCTTCCGAACTAGCAGGGTCGTAACTGTGAAACCTTGGTCCACAGGGTTAAGTGGGCAGCTGCAGAAGGCTTTCATCACAGGTGTGCCAAATCTCAGACGAGCAGAGGTTCAAGCAGCTTGTGAAGATTTCAGCAACATCATCGGTTCTATTCCAGAGGGCACTGTTTACAAAGGGACTCTTTCCAGTGGTGTTGAGATTGCTGTAGTATCTACTGCAGTGACCTCATCTAAATACTGGCCTAAAACTATGGAAGCTCAATTTAGAAGAAAGATAGAGACCTTATCCCGTGTGAACCACAAGAACTTTGTGAATCTTATCGGGTACTGTGAAGAGAAGAAACCATTCACAAGAATGATGGTCTTTGAGTATGCTCCAAATGGAACTCTCTTTGAACATCTACATATAAGAGAAGCAGAGCAGCTAGACTGGGGAATGAGAATGAGGATTGCTATGGGAATAGCTTATTGCCTAGAACATATGCATCAGCTGGAACCACCCATTTCCCTCAGAAACCTTCAGTCTTCATCTATATATCTCACTGAAGACAATGCTGCTCAAGTATCAGACCTTTGTTTCTGGAATGACATGGCTGCTGCTACAAAGAAAAGTTCTGCAGCCACAGAGCCATCGGAAACACCGTCAACATACCCCAAGGAAAATGTTTATAGCTTTGGCGTTATACTGTTTGAGTTGATCACAGGGCGAACTCCCTATCCTGTGGAGATTGGCTTTCTGTCACAGTACTTAACAATGGGGCAATCCCTGAGAGATTTGGTGGATCCAACTCTGAACTCTGTGCAAGCAGAAGAGGTTGAGAAATGGTGGGAATTGATAAAAGAGTGCTTGCATTCAGAACCAGAGAAAAGGCCTACTATGAGAGAGGTTGCAGCTAAGTTGAAGGAAATAACTGGCATGGGACCTGATGGAGCAACTCCAAAATCTTCCCCTCTTTGGTGGGCAGAACTCGAAATTATGTCCACGGATTCTGCCTGA 1959 0.4456 MEEKGLVVLMVMLSLFASSFSVSSSPLNNEGMMHDDGLALLKLKNRVVRDPFGALSNWNGEGVHTDPCSWFGVECSVHGKVVSLNLKDLCLEGTLAPEIGKLTHIKSIILRNNSLFGEIPKEISQLEELEVLDLAHNNFKGSFPSDPGSNPSLTTLPIDHHGDLHYKRKLLHRSKARRLRDDNKESISPSSSPFPSSLPPDYEPFSPSESPSNPPSALTPSPYILPPLRSPEVSPSPSPSSIFLTPSISPMVTPTPGISLPANPPTVVSSPSQSNWISEPSPASFWNQGSTKSFKPQKSLIIWSTAGGVSLLVVVSAIVFTCFRTSRVVTVKPWSTGLSGQLQKAFITGVPNLRRAEVQAACEDFSNIIGSIPEGTVYKGTLSSGVEIAVVSTAVTSSKYWPKTMEAQFRRKIETLSRVNHKNFVNLIGYCEEKKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWGMRMRIAMGIAYCLEHMHQLEPPISLRNLQSSSIYLTEDNAAQVSDLCFWNDMAAATKKSSAATEPSETPSTYPKENVYSFGVILFELITGRTPYPVEIGFLSQYLTMGQSLRDLVDPTLNSVQAEEVEKWWELIKECLHSEPEKRPTMREVAAKLKEITGMGPDGATPKSSPLWWAELEIMSTDSA 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1384g00006 652 Pfam Leucine rich repeat N-terminal domain 35 76 IPR013210 -
Pral1384g00006 652 Gene3D Ribonuclease Inhibitor 32 190 IPR032675 -
Pral1384g00006 652 SUPERFAMILY Protein kinase-like (PK-like) 349 621 IPR011009 -
Pral1384g00006 652 MobiDBLite consensus disorder prediction 193 234 - -
Pral1384g00006 652 MobiDBLite consensus disorder prediction 171 240 - -
Pral1384g00006 652 Gene3D Phosphorylase Kinase; domain 1 339 445 - -
Pral1384g00006 652 PANTHER PROTEIN MALE DISCOVERER 2 13 649 - -
Pral1384g00006 652 ProSiteProfiles Protein kinase domain profile. 363 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1384g00006 652 FunFam Leucine-rich repeat receptor-like kinase 38 161 - -
Pral1384g00006 652 Gene3D Transferase(Phosphotransferase) domain 1 447 627 - -
Pral1384g00006 652 Pfam Protein tyrosine and serine/threonine kinase 367 621 IPR001245 GO:0004672|GO:0006468
Pral1384g00006 652 SUPERFAMILY L domain-like 36 160 - -
Pral1384g00006 652 FunFam Inactive receptor-like serine/threonine-protein kinase 337 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1384g00006 Pral-Chr1384 48065 52322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1384g00006 10 556 Receptor kinase-like Gene Family AT2G23950 28.295 1.34e-43 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pral1384g00006 PK_Tyr_Ser-Thr 5.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1384g00006 - - gmx:100814122 781.941