Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1383g00001 ATGCCTCGTCTATTGAACGCATCTCCCAACACAGCGTTGCCACCTCCTTCTCCATCGGAGGAGTATATAATGGATGAACACTTGGGGATTTTGAAAGTCATCGTTGTGCAAGGAAAACGATTAGTGATTCGGGATTTCAAGAGTAGCGATCCTTATGTTGTGGTAAAGCTAGGAAATCAGACAGCAAAGACTAAGGTGATTAATAGTTGCTTGAGCCCTGTTTGGAATGAAGAGCTTAGTTTCACTCTGACAGAACCTGTGGGAGTTCTAAATTTGGAAGTGTTCGATAAGGATCTTTTGAAGAGTGATGACAAGATGGGAAATGCCTTCCTCAACCTTCAACCACTATTCTCTGCAGCTAGAATAAGAGACGTTTTACGGGCTTCCTCCGGTGAAACAACAATAAGGAAGCTCGTACCCGACAGCGAAAACTGCCTCGTTCGCGAAAGCAGCATCAACAGTGTTAATGGCGAACTGGTGCAAAACGTTTGGTTACGGCTTCGGGGAGTTGAGTCTGGTGAGCTTGAGTTGACAATCAAGTTCATCACTCCGACCACTCCCTCAGCATAA 570 0.4526 MPRLLNASPNTALPPPSPSEEYIMDEHLGILKVIVVQGKRLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLSPVWNEELSFTLTEPVGVLNLEVFDKDLLKSDDKMGNAFLNLQPLFSAARIRDVLRASSGETTIRKLVPDSENCLVRESSINSVNGELVQNVWLRLRGVESGELELTIKFITPTTPSA 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1383g00001 189 Gene3D C2 domain 26 186 IPR035892 -
Pral1383g00001 189 Pfam C2 domain 29 122 IPR000008 -
Pral1383g00001 189 CDD C2_ArfGAP 28 173 - -
Pral1383g00001 189 ProSiteProfiles C2 domain profile. 12 126 IPR000008 -
Pral1383g00001 189 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 26 183 IPR044562 -
Pral1383g00001 189 SMART C2_3c 30 125 IPR000008 -
Pral1383g00001 189 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 25 182 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1383g00001 Pral-Chr1383 12586 15956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1383g00001 24 182 C2H2 Transcription Factor Family AT4G21160 41.509 7.15e-36 126