Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1379g00038 ATGGTGGAAAGGAAGCAGTTCAAGACCAGGCTATGTGTGCCATATCAGAAAGGTCGCTGTTCACGCCAAAATTGCACCTTTGCTCATGGGAATGCGGAGTTGCGGCGATTCTCTGGCTCATATAGTGGTAGGCAAGACTATTCCAGTAGTGACTTGAGAGGAAAACTTGAAAGAAGGCATTTCTCACCTCGCAGGTTATCACCAGCAAGAGATGCAAGGAGCCGCCAAAATATTCATGATTACAGCCCTGGGAGGCCCTTGGAGAAAAGGAGTGATAGGAAGCGCAAGAGAGATAAGGGCATTGCAGGCCAAAGTGATGTTTCGGGAAGCTTGAGATTCTCTGATAGAATCCAAGATAAAGTTAGAGAAGGAAAACTGCATTCCTCCGGTTCAAAAAATAGTCTTGAGGAGCAGCTGAAGAAAGTGCAGTTGGAAATCAGCATGCTTGATGAGCAAAAGTTTCAATTTGGGGTCTGCTTGGATGAGAGTGTTCAAGAAGTGGATAGCCTTAATTCTAGAATTCAGGAACTGCAAGCTCAATTATTTAAAGAGAATGAAGAATGTAAAAGGGTCACGTCAAAAATAAGGAAGTTTATTAAAGCACATAGTCAAAACACTCGATTACAAGATGAATTAAGGAGATCACAGGCTCGACTTCAAAGGTTGGGAAATCAGCTTGACTCGGACATTGCTAGAACTGGTGTCAATGAAGAAGACTTGAGTATTGATATTGTAAGCAATGCTGAGGATGTAGGTTTTCCATCCATCATCAGAGATAATGTGGAGCAGAATGATGCTTCTCCACACAGAAAAAGGCTGCCTGCTGGCCGTGATGCTGTTGAAGAAACAAAACAAGCCAGAACCAGGAAGCGTTCTCGGTGGAATTTGGCTGCTGAGTCAAACGATAAGGATTATGAGGGCTCTGAAGCCCCAAATAATGGGGCTCAAACGACTAAGTCCCATAACATTGAAGGCAGGCCAAAGAAAGGAACATCTTGTTCTTCTGGCAACCACAGCTTAGAAAAGTTGAAGGAAAGCAGGGTTGGTGTGCCATCAACCAGCATGGCAGCTCATGTGGTTGATGAGGAAGTTGAGATTGAGCTTGATGATAAAATTGAGAGAACCGAAACTGCACCATCAGAAAATGAGAATGAAGTGGCATTTAAGGTGAGGAGTTTACCAATGCTTCCCCCAACTCTGACGACTGCGGGAACGAATTATTCACAGTATGAGGGTGATGATGAGAATGTGAACGTGGATGGGCTTGGTGAAGAGGCAGCAATTGCACACATGGATATAGTCTAA 1305 0.4406 MVERKQFKTRLCVPYQKGRCSRQNCTFAHGNAELRRFSGSYSGRQDYSSSDLRGKLERRHFSPRRLSPARDARSRQNIHDYSPGRPLEKRSDRKRKRDKGIAGQSDVSGSLRFSDRIQDKVREGKLHSSGSKNSLEEQLKKVQLEISMLDEQKFQFGVCLDESVQEVDSLNSRIQELQAQLFKENEECKRVTSKIRKFIKAHSQNTRLQDELRRSQARLQRLGNQLDSDIARTGVNEEDLSIDIVSNAEDVGFPSIIRDNVEQNDASPHRKRLPAGRDAVEETKQARTRKRSRWNLAAESNDKDYEGSEAPNNGAQTTKSHNIEGRPKKGTSCSSGNHSLEKLKESRVGVPSTSMAAHVVDEEVEIELDDKIERTETAPSENENEVAFKVRSLPMLPPTLTTAGTNYSQYEGDDENVNVDGLGEEAAIAHMDIV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1379g00038 434 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Pral1379g00038 434 MobiDBLite consensus disorder prediction 310 339 - -
Pral1379g00038 434 MobiDBLite consensus disorder prediction 263 306 - -
Pral1379g00038 434 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 421 IPR045868 GO:0046872
Pral1379g00038 434 Coils Coil 132 152 - -
Pral1379g00038 434 Gene3D - 1 36 - -
Pral1379g00038 434 MobiDBLite consensus disorder prediction 39 114 - -
Pral1379g00038 434 Coils Coil 205 225 - -
Pral1379g00038 434 Coils Coil 160 194 - -
Pral1379g00038 434 MobiDBLite consensus disorder prediction 50 102 - -
Pral1379g00038 434 MobiDBLite consensus disorder prediction 259 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1379g00038 Pral-Chr1379 213797 220467 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral1379g00038 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1379g00038 - - gmx:100793596 476.092