Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1379g00037 ATGGTGGAAAGGAAGCAGTTCAAGACCAGGCTATGTGTGCCATATCAGAAAGGTCGCTGTTCACGCCAAAATTGCACCTTTGCTCATGGGAATGCGGAGTTGCGGCGATTCTCTGGCTCATATAGTGGTAGGCAAGACTATTCCAGTAGTGACTTGAGAGGAAAACTTGAAAGAAGGCATTTCTCACCTCGCAGGTTATCACCAGCAAGAGATGCAAGGAGCCGCCAAAATATTCATGATTACAGCCCTGGGAGGCCCTTGGAGAAAAGGAGTGATAGGAAGCGCAAGAGAGATAAGGGCATTGCAGGCCAAAGTGATGTTTCGGGAAGCTTGAGATTCTCTGATAGAATCCAAGATAAAGTTAGAGAAGGAAAACTGCATTCCTCCGGTTCAAAAAATAGTCTTGAGGAGCAGTTGGAAATCAGCATGCTTGATGAGCAAAAGTTTCAATTTGGGGTCTGCTTGGATGAGAGTGTTCAAGAAGTGGATAGCCTTAATTCTAGAATTCAGGAACTGCAAGCTCAATTATTTAAAGAGAATGAAGAATGTAAAAGGGTCACGTCAAAAATAAGGAAGTTTATTAAAGCACATAGTCAAAACACTCGATTACAAGATGAATTAAGGAGATCACAGGCTCGACTTCAAAGGTTGGGAAATCAGCTTGACTCGGACATTGCTAGAACTGGTGTCAATGAAGAAGACTTGAGTATTGATATTGTAAGCAATGCTGAGGATGTAGGTTTTCCATCCATCATCAGAGATAATGTGGAGCAGAATGATGCTTCTCCACACAGAAAAAGGCTGCCTGCTGGCCGTGATGCTGTTGAAGAAACAAAACAAGCCAGAACCAGGAAGCGTTCTCGGTGGAATTTGGCTGCTGAGTCAAACGATAAGGATTATGAGGGCTCTGAAGCCCCAAATAATGGGGCTCAAACGACTAAGTCCCATAACATTGAAGGCAGGCCAAAGAAAGGAACATCTTGTTCTTCTGGCAACCACAGCTTAGAAAAGTTGAAGGAAAGCAGGGTTGGTGTGCCATCAACCAGCATGGCAGCTCATGTGGTTGATGAGGAAGTTGAGATTGAGCTTGATGATAAAATTGAGAGAACCGAAACTGCACCATCAGAAAATGAGAATGAAGTGGCATTTAAGGTGAGGAGTTTACCAATGCTTCCCCCAACTCTGACGACTGCGGGAACGAATTATTCACAGTATGAGGGTGATGATGAGAATGTGAACGTGGATGGGCTTGGTGAAGAGGCAGCAATTGCACACATGGATATAGTCTAA 1290 0.4403 MVERKQFKTRLCVPYQKGRCSRQNCTFAHGNAELRRFSGSYSGRQDYSSSDLRGKLERRHFSPRRLSPARDARSRQNIHDYSPGRPLEKRSDRKRKRDKGIAGQSDVSGSLRFSDRIQDKVREGKLHSSGSKNSLEEQLEISMLDEQKFQFGVCLDESVQEVDSLNSRIQELQAQLFKENEECKRVTSKIRKFIKAHSQNTRLQDELRRSQARLQRLGNQLDSDIARTGVNEEDLSIDIVSNAEDVGFPSIIRDNVEQNDASPHRKRLPAGRDAVEETKQARTRKRSRWNLAAESNDKDYEGSEAPNNGAQTTKSHNIEGRPKKGTSCSSGNHSLEKLKESRVGVPSTSMAAHVVDEEVEIELDDKIERTETAPSENENEVAFKVRSLPMLPPTLTTAGTNYSQYEGDDENVNVDGLGEEAAIAHMDIV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1379g00037 429 Gene3D - 1 36 - -
Pral1379g00037 429 Coils Coil 200 220 - -
Pral1379g00037 429 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Pral1379g00037 429 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 416 IPR045868 GO:0046872
Pral1379g00037 429 MobiDBLite consensus disorder prediction 254 348 - -
Pral1379g00037 429 Coils Coil 155 189 - -
Pral1379g00037 429 MobiDBLite consensus disorder prediction 39 114 - -
Pral1379g00037 429 MobiDBLite consensus disorder prediction 305 334 - -
Pral1379g00037 429 MobiDBLite consensus disorder prediction 258 301 - -
Pral1379g00037 429 MobiDBLite consensus disorder prediction 50 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1379g00037 Pral-Chr1379 213797 220467 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral1379g00037 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1379g00037 - - gmx:100793596 465.307