Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1379g00036 ATGGTGGAAAGGAAGCAGTTCAAGACCAGGCTATGTGTGCCATATCAGAAAGGTCGCTGTTCACGCCAAAATTGCACCTTTGCTCATGGGAATGCGGAGTTGCGGCGATTCTCTGGCTCATATAGTAGGCAAGACTATTCCAGTAGTGACTTGAGAGGAAAACTTGAAAGAAGGCATTTCTCACCTCGCAGGTTATCACCAGCAAGAGATGCAAGGAGCCGCCAAAATATTCATGATTACAGCCCTGGGAGGCCCTTGGAGAAAAGGAGTGATAGGAAGCGCAAGAGAGATAAGGGCATTGCAGGCCAAAGTGATGTTTCGGGAAGCTTGAGATTCTCTGATAGAATCCAAGATAAAGTTAGAGAAGGAAAACTGCATTCCTCCGGTTCAAAAAATAGTCTTGAGGAGCAGCTGAAGAAAGTGCAGTTGGAAATCAGCATGCTTGATGAGCAAAAGTTTCAATTTGGGGTCTGCTTGGATGAGAGTGTTCAAGAAGTGGATAGCCTTAATTCTAGAATTCAGGAACTGCAAGCTCAATTATTTAAAGAGAATGAAGAATGTAAAAGGGTCACGTCAAAAATAAGGAAGTTTATTAAAGCACATAGTCAAAACACTCGATTACAAGATGAATTAAGGAGATCACAGGCTCGACTTCAAAGGTTGGGAAATCAGCTTGACTCGGACATTGCTAGAACTGGTGTCAATGAAGAAGACTTGAGTATTGATATTGTAAGCAATGCTGAGGATGTAGGTTTTCCATCCATCATCAGAGATAATGTGGAGCAGAATGATGCTTCTCCACACAGAAAAAGGCTGCCTGCTGGCCGTGATGCTGTTGAAGAAACAAAACAAGCCAGAACCAGGAAGCGTTCTCGGTGGAATTTGGCTGCTGAGTCAAACGATAAGGATTATGAGGGCTCTGAAGCCCCAAATAATGGGGCTCAAACGACTAAGTCCCATAACATTGAAGGCAGGCCAAAGAAAGGAACATCTTGTTCTTCTGGCAACCACAGCTTAGAAAAGTTGAAGGAAAGCAGGGTTGGTGTGCCATCAACCAGCATGGCAGCTCATGTGGTTGATGAGGAAGTTGAGATTGAGCTTGATGATAAAATTGAGAGAACCGAAACTGCACCATCAGAAAATGAGAATGAAGTGGCATTTAAGGTGAGGAGTTTACCAATGCTTCCCCCAACTCTGACGACTGCGGGAACGAATTATTCACAGTATGAGGGTGATGATGAGAATGTGAACGTGGATGGGCTTGGTGAAGAGGCAGCAATTGCACACATGGATATAGTCTAA 1302 0.4401 MVERKQFKTRLCVPYQKGRCSRQNCTFAHGNAELRRFSGSYSRQDYSSSDLRGKLERRHFSPRRLSPARDARSRQNIHDYSPGRPLEKRSDRKRKRDKGIAGQSDVSGSLRFSDRIQDKVREGKLHSSGSKNSLEEQLKKVQLEISMLDEQKFQFGVCLDESVQEVDSLNSRIQELQAQLFKENEECKRVTSKIRKFIKAHSQNTRLQDELRRSQARLQRLGNQLDSDIARTGVNEEDLSIDIVSNAEDVGFPSIIRDNVEQNDASPHRKRLPAGRDAVEETKQARTRKRSRWNLAAESNDKDYEGSEAPNNGAQTTKSHNIEGRPKKGTSCSSGNHSLEKLKESRVGVPSTSMAAHVVDEEVEIELDDKIERTETAPSENENEVAFKVRSLPMLPPTLTTAGTNYSQYEGDDENVNVDGLGEEAAIAHMDIV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1379g00036 433 Coils Coil 131 151 - -
Pral1379g00036 433 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Pral1379g00036 433 Coils Coil 204 224 - -
Pral1379g00036 433 Coils Coil 159 193 - -
Pral1379g00036 433 MobiDBLite consensus disorder prediction 49 101 - -
Pral1379g00036 433 MobiDBLite consensus disorder prediction 39 107 - -
Pral1379g00036 433 MobiDBLite consensus disorder prediction 258 352 - -
Pral1379g00036 433 Gene3D - 1 36 - -
Pral1379g00036 433 MobiDBLite consensus disorder prediction 309 338 - -
Pral1379g00036 433 MobiDBLite consensus disorder prediction 262 305 - -
Pral1379g00036 433 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 420 IPR045868 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1379g00036 Pral-Chr1379 213797 220467 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral1379g00036 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1379g00036 - - gmx:100793596 466.077