Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1379g00034 ATGGGGAGCCAGAATCATTTGGGAGTGTTGTTCCTTTGCTTTATAGCACTGATTGGATCAAGTCAGGCTCAATTGCAGCAAGGGTTCTATGCCAAGAGCTGCCCAAAAGCTGAGAAGATCATTCAAGACTTCGTGACTCAGCATATCAGAAATGCTCCATCTTTGGCTGCTGCTCTGATCAGAATGCACTTTCATGATTGCTTTGTCAGGGGCTGTGATGCATCAGTGCTTCTGAACTCAACAACAAACCAAGCAGAGAAGAATGCTCCGCCAAATCTCACTGTCAGAGGATTTGACTTCATTGACAGAATCAAGAGCCTTGTAGAAGCTGAATGCCCTGGTGTAGTTTCTTGTGCTGATATTATCACTTTGGCTGCCAGAGACTCCATTGTTGCCACAGGAGGTCCCTTCTGGAATGTTCCAACAGGTAGAAGAGATGGAACTGTATCTAACCTGTTGGAAGCCAGAAACCAAATTCCTGCTCCGACTAGCAACATCAGCACGCTCCAGACACTCTTTGGCAACCAGGGACTTGATCTCAAAGACTTAGTCCTGCTTTCAGGTGCTCACACAATTGGTATCTCCCATTGCCCATCATTTTCCAACCGATTGTATAATTTCACCGGTAAATTAGATCAAGACCCAAATCTAGACAGTGAATACGCAACAAATCTCAAGACCTTCAAGTGCAAAAGCATTAATGACAACACCACAAAAGTTGAGATGGACCCTGGAAGTCGCAAGACATTTGATCTTAGCTACTATAGAAATGTGCTCAAGAGAAGAGGTTTGTTCCAATCAGACGCTGCTCTGCTGACCAACTCTGTTACCAAGTCTACCATCACTCAGCTGGTCGAGGGACCAGTAGAAAACTTCTTTGCTGAATTTGCCAAGTCCGTGGAGAAAATGGGACGAATCAATGTCAAGACTGGGACACAGGGAGAGATCAGGAAGCACTGTGCAGTCGTAAATAGCTAG 978 0.4519 MGSQNHLGVLFLCFIALIGSSQAQLQQGFYAKSCPKAEKIIQDFVTQHIRNAPSLAAALIRMHFHDCFVRGCDASVLLNSTTNQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADIITLAARDSIVATGGPFWNVPTGRRDGTVSNLLEARNQIPAPTSNISTLQTLFGNQGLDLKDLVLLSGAHTIGISHCPSFSNRLYNFTGKLDQDPNLDSEYATNLKTFKCKSINDNTTKVEMDPGSRKTFDLSYYRNVLKRRGLFQSDAALLTNSVTKSTITQLVEGPVENFFAEFAKSVEKMGRINVKTGTQGEIRKHCAVVNS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1379g00034 325 Gene3D Peroxidase, domain 2 160 303 - -
Pral1379g00034 325 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Pral1379g00034 325 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Pral1379g00034 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 PANTHER PEROXIDASE 25-RELATED 15 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 Gene3D - 28 324 - -
Pral1379g00034 325 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 Pfam Peroxidase 42 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral1379g00034 325 FunFam Peroxidase 160 303 - -
Pral1379g00034 325 FunFam Peroxidase 28 177 - -
Pral1379g00034 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Pral1379g00034 325 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1379g00034 Pral-Chr1379 204344 205945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1379g00034 7 325 Peroxidase AT1G05260 71.160 1.01e-172 480