Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1375g00002 ATGAGACTCAGAGATCTTCATCTCAAGCTCAAGGCATTACGTCTAAAGCGATTAGTGTGGGGGTTTAATGGAGGGAGGAGGAGGAGGAGGACGACGAAGAAGAAGCCGTCATGGATGAACCCAGCAGTGTCACATGGCTACCAAGTGATCGATCGGGGGATAATCGGAGGATACTGTTCCGATGAGCATGAGAATGATTCATCAGTTGTGGTGCAGAGAGAACAACAGACGGAAAACACAGAACTCTGGTATTTTGGAATATTTGACGCTCTAATTGGAGATGGCGTCACCAAGTATATGCAGTCCCATTTATTTCAGAAGCAGCTTAAAGAGTCACACATAAGTAGAAAATGCAAGGAAACAATGAAAAGAGCATATTTGAGTTTAACATCAAAGATGAGACCAGAGGAAGAGACGATGAGTCACCAGATCAGCTCAGTATCAGCAATGGTCATCAATGGCGAAAAGCTTGTGACGGCACAAACCGGACATTGCAAAGCTGTTGTGTGTAGAGATGGGATTGCTTATCACACAGATCCCAGTCCACAACACGTGCGCAAAACACCCCATTGGACTCACAAACTCTTTTCAGGATACTCTGTACATGCAGGTAGAAGGCAATATAGAAGTTCGGAACTTGTGGTCAGAGCTGAAAAGATTGATTCTGATACTGAATTTTTGATCTTAGCCAGCAATGGCATATGGGACGTGATGAAGAATCAAGAGGCAGTGAATCTCATAAGGCACATAGAGAATCCCAACGAAGCTGCTAAATGTTTGGCTAATGAAGCTTTGAATAGAATGAGCAAAAGCAACATCTCGTGCATCATTATTCGATTCGACTGA 846 0.4362 MRLRDLHLKLKALRLKRLVWGFNGGRRRRRTTKKKPSWMNPAVSHGYQVIDRGIIGGYCSDEHENDSSVVVQREQQTENTELWYFGIFDALIGDGVTKYMQSHLFQKQLKESHISRKCKETMKRAYLSLTSKMRPEEETMSHQISSVSAMVINGEKLVTAQTGHCKAVVCRDGIAYHTDPSPQHVRKTPHWTHKLFSGYSVHAGRRQYRSSELVVRAEKIDSDTEFLILASNGIWDVMKNQEAVNLIRHIENPNEAAKCLANEALNRMSKSNISCIIIRFD 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1375g00002 281 Gene3D - 54 190 IPR036457 -
Pral1375g00002 281 Pfam Protein phosphatase 2C 206 273 IPR001932 -
Pral1375g00002 281 Pfam Protein phosphatase 2C 76 177 IPR001932 -
Pral1375g00002 281 SMART PP2C_4 48 278 IPR001932 -
Pral1375g00002 281 CDD PP2Cc 66 280 IPR001932 -
Pral1375g00002 281 ProSiteProfiles PPM-type phosphatase domain profile. 66 280 IPR001932 -
Pral1375g00002 281 Gene3D - 193 281 IPR036457 -
Pral1375g00002 281 SUPERFAMILY PP2C-like 62 281 IPR036457 -
Pral1375g00002 281 PANTHER PROTEIN PHOSPHATASE 65 280 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1375g00002 Pral-Chr1375 37087 39464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1375g00002 1 280 PP2C-type Phosphatase Gene Family AT3G23360 50.000 8.66e-83 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1375g00002 K19704 - pvy:116135907 290.812