Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1372g00019 ATGGTGTCGGTAAATCCGAATCCTGCTCAAGGCTTCTACTTCTTCGATCCCTCCAGGATGGGGCTTCCCGGTGTCAATCCTACGCCGCCACTTCCCCTTACTGCTACGGCTTCTTCGTCCACGGCCACGCCGGCTTCGTACGGGGACGATCTGAGTAAGAAGATCAGAAAACCATACACGATTACCAAGTCCAGGGAGAGCTGGACGGAGCAGGAGCACGACAAGTTTCTCGAAGCTCTCCAATTATTTGACCGTGACTGGAAGAAGATTGAAGCATTTGTTGGTTCAAAAACTGTTATCCAGATACGAAGTCATGCACAGAAGTATTTCCTGAAAGTTCAGAAGAACGGGACAAGTGAACATGTGCCTCCCCCTCGGCCAAAAAGAAAGGCTGCTCATCCATACCCACAAAAGGCACCTAAAAATGCAGCTCCAGCAGTATCCCAAGTTACAGTGCCATTGCAATCATCATCTTCTTTCATTGAGCCCTCGTACATTTATAGGCCAGACTCTTCATCTGCGCTTGGAACTCCAGTTACCCGTGTGCCTTTGTCAAATTGGACTTGTAATGTTAGCCCACAGCCCAGTGTGCCACAAGTGACTAAAGATGAGATGGGGTTGCATGGGCAAGCTGCTTCTCTAAATTGTTGCTATAGCAGTAGTAATGAGAGCACTCCAAGGGCTTGTCCAGGTAGCAAAGTTATTGATCAAGGAAACTCAGGCAAGCTGATCAAAGATGCAGTAATGCCAGATTTTGCACAAGTTTACAGCTTTATTGGTAGTGTGTTTGATCCAAATGCTGCAAATCACTTGGAGAGACTGAAACAGATGGACCCGATAAATGTGGAAGCTGTATTATTATTGATGAGAAACCTCACCATCAATTTAATGAGTCCCAAATTTGCAGATCATGTAAGACCTGTTCCCTAG 930 0.4634 MVSVNPNPAQGFYFFDPSRMGLPGVNPTPPLPLTATASSSTATPASYGDDLSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAAPAVSQVTVPLQSSSSFIEPSYIYRPDSSSALGTPVTRVPLSNWTCNVSPQPSVPQVTKDEMGLHGQAASLNCCYSSSNESTPRACPGSKVIDQGNSGKLIKDAVMPDFAQVYSFIGSVFDPNAANHLERLKQMDPINVEAVLLLMRNLTINLMSPKFADHVRPVP 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1372g00019 309 CDD SANT 67 110 IPR001005 -
Pral1372g00019 309 Pfam Myb-like DNA-binding domain 65 110 IPR001005 -
Pral1372g00019 309 ProSiteProfiles SANT domain profile. 63 116 IPR017884 -
Pral1372g00019 309 MobiDBLite consensus disorder prediction 114 146 - -
Pral1372g00019 309 FunFam protein REVEILLE 6 isoform X1 67 115 - -
Pral1372g00019 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
Pral1372g00019 309 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Pral1372g00019 309 NCBIfam myb-like DNA-binding domain, SHAQKYF class 63 112 IPR006447 GO:0003677
Pral1372g00019 309 SUPERFAMILY Homeodomain-like 59 115 IPR009057 -
Pral1372g00019 309 SMART sant 64 112 IPR001005 -
Pral1372g00019 309 Gene3D - 68 115 - -
Pral1372g00019 309 PANTHER SWI/SNF COMPLEX-RELATED 37 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1372g00019 Pral-Chr1372 78983 82651 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral1372g00019 Myb_DNA-binding 2.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1372g00019 - - gmx:778090 440.654