Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1369g00011 ATGAATCCTTCTGATCTTCCCCAATGTTCCGTCTTCTTCTTCCTTCTGCTCCTACTTTTCGTTATCACAGTTCATGCCGATGATAGATTCAAAAACTGCAGTAGCCACTTCAACTGTGGAATCGTCAACAACGTTGGGTATCCATTCTGGGGAGATAACAGGGCAGACTACTGTGGTCAGCCTGATTTCCATCTCGCTTGCCAACACAATACTCCAAAGTTGATCGTCAAATCTGTAACTTATAGGATTCTGAGTTTCGACCTCAATGATCAGAGACTCACAGTGGCCAGGGATGACTATTGGACAACTATATGTCCAACTCAACACATAAACACAAGCTTCGATTCCACCATGTTCAAGCTTTCTGATGGGTTTCGACAATTCGTCTTGCTTTATGATTGCAGCGACAGTTTTGATGCAATGAGTGACTCTATCAATTCATCAAGCACAGAGTGCTCCACTATTGACGGCTCGACGGAAGAAGTCTACTATGCGATCCTATCTTACGGTATTGATTTCACAAGATTTTGTGAGGTGGTTGTTGTTCCTATAACGAATGCCTTCGTTGATTTGAGTGCAACAAGTGTGTTCATTCTGGTGGGCAGTGCGGGCATAGTGATCAGAAGTTCTTGTTTCTGCAGCAACGGAAGTCAAGGAACTGCGACGTGTTCTTCATCAGGTGGGCTTTCAGGTAAAAGGTCTAAGAATACGGTTGCTGTAGGTGTTGGTGTTGGTGTTGGTGTTGGAGTTGCAGCTTTTTGTGGCGTTCTCATTGTATGTTTGTTCTGCTTTGTTATGAAAAGAAGGAAAAGAAAAGTTGAACAGTTGAAAAGCAATAAGAACCTCTTGTCGCCATCATTAAGCAATATTAATGGCGGTGTGACAACCTCTACAACTGCAAATAGTATGGCTCAAACTGCTCCTTCTTACCAAACCTCCAAGCTTGACTCTGCGCAGAAGAGTTTTTACTTTGGAGTTCAAGTTTTTAACTATGCTGAACTAGAAGAAGCTACCAAAAATTTTGACCCTTCCATGGAACTTGGTGATGGAGGCTTTGGAACTGTTTATTATGGAACCCTTAAAGACGGACGTGTGGTGGCAGTAAAACGCCATTATGAAAGCCATGCGAAACGTGTAGATCAGTACATGAATGAAGTCGAGATCCTAGCTCGCTTACGACATGACAACCTCGTAGCACTGTATGGATGTACCTCCAGACACAGTCGAGAACTCATCCTTGTCTATGAGTACATTTCTAATGGAACAGTCGCCGACCATCTCCATGGCAAACTATCTCGCTCATCTTTGCTTCCTTGGCCTATACGCATGAACATAGCAGTAGAAACAGCCGAAGCCTTAGCCTACCTTCACGAATCAGATGTCATACACCGAGACGTCAAAACCAACAACATTCTCCTAGACAACAATTTCCGAGTTAAGGTTGCTGATTTTGGTCTCTCACGTTTGTTTCCTAATCATGTCACACATGTTTCTACTGCTCCACAAGGCACACCTGGTTATGTCGATCCTGAGTATTATCAGTGCTATCAGTTAACTGATAAGAGTGATGTTTATAGTTTTGGGGTGGTATTAATCGAGCTCATATCATCCTTACAAGCTGTGGATGTAACTAGGAATCATCGTGACGTAAACTTAGCCAACATGGCTGTGGATAGGATTCAGAATAATGCAGTGGATGAGTTGGTTGATCCATATTTAGGGTTCAAAACGGACAATGCTGTGAGGAAGATGACTACCGGAGTAGCAGAATTAGCTTTCAGGTGTTTGCAGAAGGAGAGAGATATGAGACCTTCCATGAAAGAGGTGATTGAGGTCTTGAGAGAGATCCAAGGTAAGGAGTATAACGTGAAGGACAAGGAAGTGATGAAGATGATGGGTAAGGCAGAAGAAATGGTGCTTTTGAAAAATTGCAGTGCACCAGTTTCACCAAATTCGGTTTCTGATAAATGGGTTAGCTTCTCTTCTGCGTCTAACTCCTCACAGAATCTATCATCTCCTAATTATTCTGTTGGTAAGACTTAG 2043 0.4278 MNPSDLPQCSVFFFLLLLLFVITVHADDRFKNCSSHFNCGIVNNVGYPFWGDNRADYCGQPDFHLACQHNTPKLIVKSVTYRILSFDLNDQRLTVARDDYWTTICPTQHINTSFDSTMFKLSDGFRQFVLLYDCSDSFDAMSDSINSSSTECSTIDGSTEEVYYAILSYGIDFTRFCEVVVVPITNAFVDLSATSVFILVGSAGIVIRSSCFCSNGSQGTATCSSSGGLSGKRSKNTVAVGVGVGVGVGVAAFCGVLIVCLFCFVMKRRKRKVEQLKSNKNLLSPSLSNINGGVTTSTTANSMAQTAPSYQTSKLDSAQKSFYFGVQVFNYAELEEATKNFDPSMELGDGGFGTVYYGTLKDGRVVAVKRHYESHAKRVDQYMNEVEILARLRHDNLVALYGCTSRHSRELILVYEYISNGTVADHLHGKLSRSSLLPWPIRMNIAVETAEALAYLHESDVIHRDVKTNNILLDNNFRVKVADFGLSRLFPNHVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVVLIELISSLQAVDVTRNHRDVNLANMAVDRIQNNAVDELVDPYLGFKTDNAVRKMTTGVAELAFRCLQKERDMRPSMKEVIEVLREIQGKEYNVKDKEVMKMMGKAEEMVLLKNCSAPVSPNSVSDKWVSFSSASNSSQNLSSPNYSVGKT 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1369g00011 680 CDD STKc_IRAK 347 616 - -
Pral1369g00011 680 Pfam Protein kinase domain 344 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1369g00011 680 Pfam Wall-associated receptor kinase galacturonan-binding 33 97 IPR025287 GO:0030247
Pral1369g00011 680 Coils Coil 680 680 - -
Pral1369g00011 680 SMART serkin_6 341 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1369g00011 680 MobiDBLite consensus disorder prediction 661 680 - -
Pral1369g00011 680 Gene3D Phosphorylase Kinase; domain 1 311 417 - -
Pral1369g00011 680 Gene3D Transferase(Phosphotransferase) domain 1 418 639 - -
Pral1369g00011 680 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 662 IPR044652 GO:0004672
Pral1369g00011 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Pral1369g00011 680 FunFam receptor-like protein kinase FERONIA 302 417 - -
Pral1369g00011 680 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Pral1369g00011 680 SUPERFAMILY Protein kinase-like (PK-like) 321 617 IPR011009 -
Pral1369g00011 680 ProSiteProfiles Protein kinase domain profile. 341 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1369g00011 680 FunFam Wall-associated receptor kinase-like 20 418 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1369g00011 Pral-Chr1369 100125 104791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1369g00011 37 667 Receptor kinase-like Gene Family AT1G25390 41.945 1.07e-150 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral1369g00011 Pkinase 6.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1369g00011 - - qsa:O6P43_005636 645.58