Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1369g00007 ATGGAAAATCGGATTAATATTATTGCAATTGTATCTGCCGGCGGTGGCGTTGGGATAGTGATAGTCTTGATCGCAATAATTGGTTGTCGTAGTGGATGTTTTGAATTAGGACAAAAGATTTCCAAGGAAAGAACATACGACGATCATCACCATGTTGAGACATTCGTGGAAACTTATGGCACTTTGGCACCCAGAAAATATACTTACTCGGAAGTGAGAAGAATTACAAAGTCATTCAAAACAAAAATTGGCCAGGGTGGTTATGGAACTGTGTACAAAGCCACTATGCCCGATGGTCGTCTTGTGGCAGTAAAAGTTCTCAGTGAGACCAAGGGCAATGGAGAAGAATTCATAAACGAAGTCGCAAGTATTAGCAGAACATCGCATGTAAATATAGTCACTTTGTTGGGATTCTGTTATGAGAAGAACAAAAGAGCTTTGATCTATGAATTCATGCCCAATGGCTCATTAGAGAAGTTCATCTATAAAGGAGAATATTCCTTAAATCCAGTCTGTGATTTTGAATGGATGAGACTCTATCAAATTTCAATCGGTATTGCTCGAGGATTAGAGTACTTGCATCGAGGGTGTAACACAAGAATCCTACATCTTGATATCAAACCCCAAAATATCTTGTTAGATGAAGATTTTTGTCCAAAAATATCTGATTTTGGGCTCGCCAAGATATGTTATAAAAAGGAGAGTATTGTATCAATATCTAGCATGAGGGGAACTGCAGGATACATTGCACCAGAAGTCTTCAGTCGCACATATGGTGGAGTTTCATACAAATCTGATGTCTATAGTTATGGCATGTTAATCCTTGAAATGATCGGAGGAAGAAAGAATTTTGAGAGTGGAGGGTCACATGCTAATACTAGTGATGATATGTACTTTCCCAATTGGATTTATAAAGAATTTGAGCAATCCAATGTTGTTGCAACAAATGTGTCCATCACAGAAGAGGAAAAAGAAGTGGTAAGAAAGCTAAGTTTGGTTGGTTTATGGTGTATTCAGACAGATCCAGCAATGCGGCCATCAATGAGTAAAGTGGTTGAGATGTTAGAAGGACCCAATGAATCAGTGTCACTCCCACCAAAACCTTCTCTCTCTTCTCCTCATCCAAGGACACTGGTCCTTCATGCTTCAGATGTCTCCTCCTGCACCGGGCTTGATGATTCCAATTCCACGCCTATTCCAATGGAAACAACTGCATGA 1218 0.3966 MENRINIIAIVSAGGGVGIVIVLIAIIGCRSGCFELGQKISKERTYDDHHHVETFVETYGTLAPRKYTYSEVRRITKSFKTKIGQGGYGTVYKATMPDGRLVAVKVLSETKGNGEEFINEVASISRTSHVNIVTLLGFCYEKNKRALIYEFMPNGSLEKFIYKGEYSLNPVCDFEWMRLYQISIGIARGLEYLHRGCNTRILHLDIKPQNILLDEDFCPKISDFGLAKICYKKESIVSISSMRGTAGYIAPEVFSRTYGGVSYKSDVYSYGMLILEMIGGRKNFESGGSHANTSDDMYFPNWIYKEFEQSNVVATNVSITEEEKEVVRKLSLVGLWCIQTDPAMRPSMSKVVEMLEGPNESVSLPPKPSLSSPHPRTLVLHASDVSSCTGLDDSNSTPIPMETTA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1369g00007 405 PANTHER RUST RESISTANCE KINASE LR10-RELATED 49 372 IPR045874 GO:0004672
Pral1369g00007 405 MobiDBLite consensus disorder prediction 384 405 - -
Pral1369g00007 405 SUPERFAMILY Protein kinase-like (PK-like) 55 356 IPR011009 -
Pral1369g00007 405 Pfam Protein kinase domain 80 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1369g00007 405 Gene3D Transferase(Phosphotransferase) domain 1 152 364 - -
Pral1369g00007 405 ProSiteProfiles Protein kinase domain profile. 77 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1369g00007 405 CDD STKc_IRAK 83 357 - -
Pral1369g00007 405 FunFam S-receptor-like serine/threonine-protein kinase 46 151 - -
Pral1369g00007 405 FunFam PR5-like receptor kinase 152 366 - -
Pral1369g00007 405 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Pral1369g00007 405 SMART serkin_6 77 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1369g00007 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Pral1369g00007 405 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524
Pral1369g00007 405 Gene3D Phosphorylase Kinase; domain 1 50 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1369g00007 Pral-Chr1369 77554 83094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1369g00007 65 378 Receptor kinase-like Gene Family AT5G38280 59.875 2.21e-131 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral1369g00007 Pkinase 8.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1369g00007 - - aprc:113862598 480.33