Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1368g00001 TTTTATGCATCTCAGGCTGATAAGCTCCTCTCCCCAGAGTTCCAGCCTTCAGTAGAGCAGTTGATTCATTTCCTGCCTACCAATCGTCAAATCTTGATGTCAGCCACTTTTCCTGTCACCATTAAGGACTTTAAAGATAGATATCTTCAAAAGCCTTACGTTATTAACCTTATGGACGAGTTGACTTTGAAAGGGATCACACAATTTTATGCATTTGTGGAGGAGAGACAGAAACTCCACTGCTTGAACACTCTCTTCTCGAAGCTGCAAATAAACCAGTCAATTATTTTCTGCAATTCAGTGAACCGAGTTGAGCTCCTTGCCAAGAAAATTACAGAACTTGGGTATTCATGCTTCTATATTCATGCAAAGATGTTGCAGGATCATCGCAATAGAGTATTTCATGATTTCCGCAATGGTGCATGTAGGAATCTTGTTTGTACTGATCTTTTTACTAGAGGAATAGACATTCAAGCTGTCAATGTTGTCATTAATTTTGATTTTCCAAAGAACTCAGAAACTTACCTGCACAGGGTTGGTCGATCAGGGAGGTTTGGTCACCTTGGTTTAGCTGTGAACTTGATTACTTATGAAGACCGCTTTAATTTATATAGGATTGAACAAGAACTTGGCACTGAAATAAAGCAAATCCCACCTCACATTGATCAGGCAATTTATTGCCGGTGA 687 0.3945 FYASQADKLLSPEFQPSVEQLIHFLPTNRQILMFXATFPVTIKDFKDRYLQKPYVINLMDELTLKGITQFYAFVEERQKLHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1368g00001 229 CDD SF2_C_DEAD 67 196 - -
Pral1368g00001 229 Gene3D - 4 63 IPR027417 -
Pral1368g00001 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 224 IPR027417 -
Pral1368g00001 229 FunFam ATP-dependent RNA helicase DDX6 60 229 - -
Pral1368g00001 229 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 66 226 IPR001650 -
Pral1368g00001 229 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 6 228 - -
Pral1368g00001 229 Gene3D - 64 229 IPR027417 -
Pral1368g00001 229 Pfam Helicase conserved C-terminal domain 80 187 IPR001650 -
Pral1368g00001 229 SMART helicmild6 106 187 IPR001650 -
Pral1368g00001 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 57 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1368g00001 Pral-Chr1368 66 3148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1368g00001 5 222 Eukaryotic Initiation Factors Gene Family AT3G19760 37.727 1.65e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1368g00001 K12614 - qsu:112007702 451.055