Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral1363g00007 | ATGTCTCAAATGCTAAAACCCATCATTATCCTCGTACTATCATCAGTTCTTGTGTTGGCACCTCACTTGGTTGAAGCCGACACGCACCTGTCCGTCAACAACTATTTATACAACAGTTTGGAGCTGCTTCTCCATTGCCAATCTAAAGATGATGATCTTGGGCGTCACCTTCTTCATCCCAAAGAGAGTTTCAAGTTCCGTTTCAACCCTAATTTGTGGGGCACGACTCTGTACTATTGCAGCTTCCAATGGCCAGGTGCTGTGAAGTGGTTTAATATATATGAAGATGGTAGGGATTCATCCAATTGCGATGATGGTAAGTGCATTTGGATAATTAAACAAGACGGACCATGTCAGGTTAATGCACCTGGCTACGGTGTCATTTGCTATCCATGGAAGGGCGAGTAA | 408 | 0.4387 | MSQMLKPIIILVLSSVLVLAPHLVEADTHLSVNNYLYNSLELLLHCQSKDDDLGRHLLHPKESFKFRFNPNLWGTTLYYCSFQWPGAVKWFNIYEDGRDSSNCDDGKCIWIIKQDGPCQVNAPGYGVICYPWKGE | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral1363g00007 | 135 | PANTHER | - | 24 | 121 | IPR010264 | - | |
| Pral1363g00007 | 135 | Pfam | Plant self-incompatibility protein S1 | 29 | 132 | IPR010264 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral1363g00007 | Pral-Chr1363 | 30005 | 30412 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral1363g00007 | 28 | 135 | Carbohydrate Esterase | AT3G16970 | 36.036 | 3.16e-21 | 81.6 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral1363g00007 | - | - | pcin:129289386 | 163.31 |